Gene Information

Name : xccb100_2082 (xccb100_2082)
Accession : YP_001903487.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2415865 - 2416698 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence : 
ATGCTCGAACACACCCCGTTGAGCGAGCGCCGGGCTTGCCGCCTTGCGGGGCTGTCCCGCGATGCTTTCCGCCACGCACC
CGTGCCGACGCCAGCCACGCAGGCGCTGTCGGCGCGGCTGGTCGAGCTGGCCCAGACCCACCGCCGCTTCGGCTATCGCC
GACTGCATGATTTGTTGCGCCCGGAGTTTCCATCCGTGAATCACAAAAAGATTTATCGCCTGTACGAGGAAGCCGAGCTG
AAGGTGCGCAAACGGCGCAAGGCCAAGCGTCCGGTGGGTGAGCGGCAGAAACTGCTGGCGTCCTCCATGCCGAACGACAC
CTGGAGCATGGACTTCGTGTTCGATGCGCTGGCCAACGCACGCCGCATCAAGTGCCTGACCGTGGTCGACGACTTCACTC
GCGAGAGCGTGGACATTGCCGTGGATCACGGCATCAGCGGGGCTTACGTAGTGCGCCTGCTCGATCAGGCGGCGTGTTTC
CGTGGCTATCCACGCGCGGTCCGCACCGACAATGGCCCCGAGTTCACCAGTCGCGCCTTCATTGCCTGGACGCAGCAACA
TGGCATCGAGCACATCCTGATCGAGCCGGGTGCCCCCACGCAGAACGCCTACATCGAAAGCTTCAACGGCAAGTTCCGCG
ACGAGTGCCTCAACGAGCACTGGTTCACCTCGTTGGCACAAGCCCGGGACGTGATCGCAGACTGGCGACGCCACTACAAC
CAGATCAGGCCGCACAGCAGTTGTGGTCGCATCCCGCCGGCACAGTTCGCCGCCAACTACCGTACACAACAAGCCAACAA
CGCAGTACCCTTCAACCCCGGGCTTTATCAGTAA

Protein sequence : 
MLEHTPLSERRACRLAGLSRDAFRHAPVPTPATQALSARLVELAQTHRRFGYRRLHDLLRPEFPSVNHKKIYRLYEEAEL
KVRKRRKAKRPVGERQKLLASSMPNDTWSMDFVFDALANARRIKCLTVVDDFTRESVDIAVDHGISGAYVVRLLDQAACF
RGYPRAVRTDNGPEFTSRAFIAWTQQHGIEHILIEPGAPTQNAYIESFNGKFRDECLNEHWFTSLAQARDVIADWRRHYN
QIRPHSSCGRIPPAQFAANYRTQQANNAVPFNPGLYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 8e-57 64
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 8e-74 62
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 4e-43 61
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-36 41