Gene Information

Name : xccb100_2027 (xccb100_2027)
Accession : YP_001903432.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : RNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2357454 - 2359817 bp
Length : 2364 bp
Strand : +
Note : -

DNA sequence :
ATGCACGACACCCAGCTTGCCCAGCAGATCGCCCGCACCATCGCCGATGAGATCGGTGCCCAACCCGCCCAGGCGCGCGC
CGCCATTGCCCTTCTCGATGAAGGCGCCAGCGTTCCGTTCATCGCGCGCTACCGCAAGGAAGTCACCGGCGGTCTGGACG
ACACCCAGCTGCGCAACCTCGAAACGCGCCTGACCTACCTGCGCGAACTGGAAGACCGCCGCGCCGCGATCCTGTCCAGC
ATCGGCGAGCAGGGCAAACTCAGCGACGAACTGCGCAGCGAAATCGTCGCCGCCGACACCAAGTCGCGCCTGGAAGACCT
GTATCTGCCGTACAAGCCCAAGCGCCGCACGCGTGCGCAGATTGCGCGCGAGGCCGGGCTGGAACCGCTGGCGGACACCT
TGCTGGCCGACCCCACCCAGGCGCCGGACACCACCGCAGCGATCTACGTGGATGCCGACAAGGGCGTGGCCGACGTCAAG
GCCGCACTGGAAGGCGCCCGCGCGATCCTGATGGAGCGCTGGGGCGAAGACGCCGCGCTGGTCGGCGAACTGCGTAGCTG
GTTGAACGACAATGGCGTGATTCGAGCGCGTGTGGCCGAGGGCAAGGAAGAGGCCGGTGCCAAGTACCGCGACTACTTCG
ACCACGCCGAATCGCTGGCCAGGATTCCCTCGCATCGCCTGCTGGCCTTGTTTCGGGCACGCCGCGAAGAATTTCTGTAC
CTGGATCTGGACCCGGGCACCGATGCCGACGCCGGGCATCAGTACGCCGAAGGGCGTGTGGCGTGCAACGCCGGCATTGC
CGATCAGGGCCGCCCGGCCGATCGCTGGTTGCTCGATGCCTGCCGGCTCACCTGGCGCGCCAAGCTGCACATGCACCTGC
TGCTGGACCTGTTCAACCAGGCGCGCGAAAAGGCCGAGGCCGAGGCGATCGCGGTGTTCGGCGACAACCTCAAGGACCTG
ATGCTGGCGGCGCCCGCCGGCCCGCGCGTGGTGCTGGGCCTGGACCCGGGCATCCGCACGGGCTGCAAGATCGCCGTGGT
CGACGCGACCGGCAAGCTGGTGGCCACCGAGACGATCTACCCGCACGAACCCAAGCGGCAGTGGGACCAGTCGCTGCAGA
CGCTCAAGAAGCTGTGCCTGCAGCACAACGTGGAGCTAATCGCGATCGGAAACGGTACTGCCAGCCGCGAGACCGACAAG
CTTGCCGGCGAGGCAATCGCCTTGTGCGACGGCGCCAAGCTGCAGAAGATCGTGGTCAGCGAAGCCGGCGCATCGGTGTA
CTCCGCGTCGGAATTCGCGGCCAAGGAATTCCCGAACCTGGACGTCTCGCTGCGCGGTGCGGTGTCGATCGCGCGGCGCC
TGCAGGACCCGTTGGCCGAGTTGGTCAAGATCGAGCCCAAGGCAATCGGCGTGGGCCAGTACCAGCATGACGTGGACCAA
TATCGCCTGGCCAAGGCGCTGGACGCGCGCGTGGAAGACTGCGTCAACGCGGTGGGCGTGTACGTCAATACCGCCTCGGC
GGCCTTGCTGTCGCGCGTGTCGGGCCTGTCCAGTACGGTGGCGGAAAACATCGTGCGGCATCGCGACGACAACGGCCCGT
TCAAGCGCCGCAAAGACCTGCTCAAGGTCCCGCGCCTGGGCGACAAGACCTTCGAACAATGCGCCGGCTTCCTGCGCATT
GCCGACGGCGATGAGCCGCTGGATGTGTCGGCGGTGCACCCGGAGGCCTACCCGGTGGTGGAGCGCATCGTCAGCAGCAC
CGGCAAGCCGATCAAGGCTTTGCTGGGCGATGGCAGCTTCCTGCGGGCCCTCAAGCCGGAGCAGTTCACCGACGAGCAAT
TCGGTGTGCCCACCGTGCGCGACATCCTCAAGGAAATGGAAAAGCCCGGCCGGGACCCGCGCCCGGAATTCAAGGCGGCG
CAGTTCGCCGAGGGCGTCGAGGACATCAAGCACCTCAAGCCCGGCATGATCCTGGAAGGTGTGGTCAGCAACGTCGCGGC
CTTTGGCGCGTTCGTCGACATCGGCGTGCACCAGGATGGCCTGGTCCACATCTCGGCGCTGTCGGACACCTTCGTCAAGG
ACCCGCGCGACGTGGTCAAGGCCGGCGACATCGTCAAGGTCAAGGTGCTGGAAGTGGACGTGGCGCGCAAACGCATCGCG
CTGACCCGGCGGTTGTCGGATACGCCGCCACCGGCCGACGCGGCCGCGCAGTCACGCGACACACGTGGCGCGGGGCAGGG
CAGGCGCGATGGAGGCGGTGGTGGCGGGCGTGGCCCGGCATCCGGCACTGCCAAGCCACGGACCAGTGCGCCGCCCGCCA
ACAACGCATTGGCCGACGCCTTCGCGCGCGCCAAACGCAGCTGA

Protein sequence :
MHDTQLAQQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEDRRAAILSS
IGEQGKLSDELRSEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADTLLADPTQAPDTTAAIYVDADKGVADVK
AALEGARAILMERWGEDAALVGELRSWLNDNGVIRARVAEGKEEAGAKYRDYFDHAESLARIPSHRLLALFRARREEFLY
LDLDPGTDADAGHQYAEGRVACNAGIADQGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTLKKLCLQHNVELIAIGNGTASRETDK
LAGEAIALCDGAKLQKIVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVSSTGKPIKALLGDGSFLRALKPEQFTDEQFGVPTVRDILKEMEKPGRDPRPEFKAA
QFAEGVEDIKHLKPGMILEGVVSNVAAFGAFVDIGVHQDGLVHISALSDTFVKDPRDVVKAGDIVKVKVLEVDVARKRIA
LTRRLSDTPPPADAAAQSRDTRGAGQGRRDGGGGGGRGPASGTAKPRTSAPPANNALADAFARAKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62