Gene Information

Name : xccb100_0144 (xccb100_0144)
Accession : YP_001901550.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1404 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 166832 - 167590 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCCAGTGCACTGCGGTATTGCCCGCGCGAAGATCGCAATGGCGAACTGCGCGAACGCATCTGTGCGTTGGCACA
TCGCCATCGCCGCTATGGCGTGGGAATGATCTATCTCAAATTGCGGCAAGAAGGGCGCATCGTGAACTACAAGCGTGTGG
AACGGTTGTATCGCGAGCAGCAGCTGCAAGTGCGCCGCCGCAAGCGCAAGAAGGTCCCAATAGGCGAGCGTCAACCGCTG
CTGCGGCCATCGCAGGCCAACCAGGTGTGGTCGATGGACTTTGTGTTCGACCGCACCGCCGAAGGCCGGGTGATCAAGTG
TCTGGTGATCGTGGACGATGCAACCCACGAAGCGGTCGCCATCGAAGTGGAGCGCGCGATCTCCGGGCACGGGGTGACGC
GCGTGCTGGACCGACTGGCGCACAGTCGCGGTTTGCCGAAGGTGATCCGCACTGACAACGGCAAGGAGTTTTGCGGTAAG
GCGATGGTCGCTTGGGCGCATGCCCGTAATGTGCAACTACGGCTCATCCAGCCAGGCAAACCGAACCAGAACGCCTATGT
TGAATCCTTCAACGGCCGACTGCGCGACGAATGCCTCAACGAGCACTGGTTCCCGACGTTACTGCACGCGCGCACCGAAA
TCGAACGCTGGCGACGCGAATACAACGAGGACCGACCCAAGAAAGCAATCGGCGGCATGACGCCGGCTGCGTATGCCCAA
CATCTGGCAAACACCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRIVNYKRVERLYREQQLQVRRRKRKKVPIGERQPL
LRPSQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGK
AMVAWAHARNVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEDRPKKAIGGMTPAAYAQ
HLANTDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-49 60
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-56 56
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 3e-35 55
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-35 41