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Name : clpB (xccb100_1123) Accession : YP_001902529.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.- Position : 1287488 - 1290073 bp Length : 2586 bp Strand : + Note : - DNA sequence : ATGCGGATGGACAAGCTCACCTCGCGGTTCCAGCAGGCGCTGGCCGACGCGCAATCGCTGGCCGTGGGCCGCGACCACAA CATCATCGAACCCGTGCATGTACTGGCCGCCTTACTCGACCAGAGCGGTGGCAGCACGCGCCCGCTGCTGTCGCAGTCCG GCGTCAACGTGCCGGCACTGCGCGAGCGCCTGGGCGAAGCGCTGGACACCCTGCCCAAGGTGTCCGGGCAGGAAGGCAAC CTGTCGATCGGCAACGATCTCAATCGCCTGCTCAACCAGACCGACAAGCTCGCCCAGCAGCACGGCGATGCCTTCATCGC CAGCGAGTGGTTCGTGCTGGCCGCTGCCGACGACGCCAGCCCGCTGGGCGTGGCGTTGCGCGCGGCCGGCGGCGACAAGA AGAAGATCGAAGCGGCCATCGATAAATTGCGCGGTGGCGAAACCGTGCAATCGGAAAATGCCGAGGAGCAGCGCCAGGCG CTGGAGAAGTACACCATCGACCTGACCGCGCGCGCGGAGAGCGGCAAGCTCGATCCGGTGATCGGCCGCGACGAAGAAAT CCGCCGCACCATCCAGGTGTTGCAGCGACGCACCAAGAACAACCCGGTGCTGATCGGCGAACCGGGCGTGGGCAAGACCG CCATTGTCGAAGGCCTGGCGCAACGCATCATCAACGGCGAGGTGCCCGAAGGCCTGCGCGGCAAGCGCGTGCTGTCGCTG GACATGGGCGCGCTGATTGCCGGTGCCAAATTCCGCGGCGAATTCGAAGAACGCCTGAAGGCGGTGCTCAGCGATCTTTC CAAGAACGAAGGCCAGATCATCCTGTTCATCGATGAGCTGCACACCATGGTCGGCGCCGGCAAGGCCGATGGCGCGATGG ATGCCGGCAACATGCTCAAGCCGGCGCTGGCGCGTGGCGAGCTGCATTGCATCGGCGCCACCACGCTGGACGAATACCGC AAATACATCGAAAAAGACGCGGCGCTGGAGCGCCGTTTCCAGAAAGTCTTCGTGGGCGAGCCGACGGTGGAAGACACCAT CGCCATCCTGCGCGGCTTGAAGGAGCGCTACGCGGTGCATCACGGCGTGGAGATCACCGACCCGGCGATCGTGGCCGCGG CCACCTTGTCCAACCGCTACATCACCGACCGCCAGTTGCCGGACAAGGCCATCGACCTGATGGACGAAGCCGCATCGCGC ATCCGCATGGAGATCGATTCCAAGCCCGAAGAGCTCGACCGCCTGGAGCGCCGCCTGATCCAGCTTAAGATCCAGCGCGA GATGCTCAAGAAGGAAAAGGACGAGGCCTCGCGGCAACGCCTGGCCGATCTGGAAAGCGACATCGACAAGCTCGAACGCG AATTCTCCGACCTCAACGAAGTGTGGAAGTCGGAGAAGGCCGCGCTGCAGGGCACCACCAAGATCAAGGAGCAGATCGAG CACGCCAAGCTGGAGCTGGAAGCGGCGCAGCGTCGCCAGGACTACGCCAAGATGAGCGAGATCCAGTACGGCGTATTGCC GCAGCTGGAAAAGCAGATGCTGCTGGCCAACGAGGTCGAACATCACGACTTCAAGCTGGTGCAGGACCGCGTGACCGCCG AAGAAATCGCCGAGGTGGTGTCGCGTTGGACCGGTATTCCGGTCAACAAGATGCTGGAAGGCGAGCGCGACAAACTGCTG CGCATGGAAGACGAACTGCACCGCCGCGTGGTGGGGCAGGAAGAGGCGATCAAGGTGGTGTCCGATGCGGTGCGCCGCTC GCGTGCCGGCCTGTCCGATCCCAATCGTCCGAGCGGTTCGTTCCTGTTCCTGGGCCCGACCGGCGTGGGCAAGACCGAGC TGTGCAAGGCGTTGGCGGATTTCCTGTTCGACAGCACCGAGGCCATGATCCGCATCGACATGAGCGAGTTCATGGAGAAG CATTCGGTCTCGCGCCTGATCGGTGCGCCTCCGGGCTATGTGGGCTACGAGGAGGGCGGTTACCTCACCGAGGCGGTGCG GCGGCGCCCGTATTCGCTGATCCTGCTCGACGAAGTGGAGAAGGCGCACGCCGATGTCTTCAACATCCTGTTGCAGGTGC TCGACGATGGCCGCCTCACCGACGGCCAGGGACGTACCGTGGACTTCCGCAATACCGTCATCGTGATGACCTCCAACCTG GGCTCGCACCAGATCCAGGAGTTGTCCGGCGACGGCAGCGCCGAGGCCTACACGCAGATGAAGGCGGCGGTGATGGGGGT GGTGCAGGCGCACTTCCGCCCAGAATTCATCAACCGGCTCGACGACATCGTGGTGTTCCATCCGCTGGACAAGGCGCAGA TCAAGTCGATCGCGCGCATCCAGTTGCAGGGCCTGGAAAAGCGCCTGGCCGAACGCGGCCTCAAGCTGGACCTGGACGAC CCGGCGCTGGAATTGCTGGGCAATGTCGGCTTCGACCCGGTGTATGGCGCGCGCCCGCTGAAGCGTGCGATCCAGTCGCA GGTGGAAAACCCGCTGGCCCAGCAGATTCTCTCCGGCCAGTACACCAGCGGCGACACCGTGCGTGTACGCACCGAAGGTG GACATCTGGCGTTTACCAAGGGCTGA Protein sequence : MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSGVNVPALRERLGEALDTLPKVSGQEGN LSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQA LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSL DMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASR IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIE HAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLL RMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEK HSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL GSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDD PALELLGNVGFDPVYGARPLKRAIQSQVENPLAQQILSGQYTSGDTVRVRTEGGHLAFTKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-103 | 42 |
