Gene Information

Name : aldA (xccb100_0110)
Accession : YP_001901516.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 123836 - 125365 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGAATGCACTTCCTTCCGCCAAGTCCCTCAACACCGACCCGCAATCCATCTTCAAACCACGCTACGACAACTTCATCGG
CGGGGCGTGGGTGGCGCCGCAGGGTGGTCAGTATTTCGACAACACCACGCCGATCACTGGCAAGGTGTTCACTTCGATCG
CGCGCTCTACCGCGCCAGATATCGAAGCCGCATTGGACGCCGCGCACGCGGCCAAGGAGGCGTGGGGCAAGACCTCCACC
ACCGATCGCTCCAACGTGCTGCTCAAGATCGCCGACCGTATCGAGCAGAACCTGGAATTGCTGGCCTACGCCGAGACCTG
GGACAACGGCAAACCGGTACGCGAAACGCTCAATGCGGACGTGCCGCTATGCGTGGACCACTTCCGCTATTTCGCCGGTG
CCATCCGCGCGCAGGAAGGCGGCATCTCCGAGATCGACAGCGACACCATTGCCTATCATTTCCACGAGCCGCTCGGCGTG
GTGGGGCAGATCATCCCGTGGAATTTCCCGCTGCTGATGGCCTGCTGGAAACTCGCGCCCGCCCTGGCCGCCGGCAACTG
CGTGGTGATGAAGCCGGCCGAGCAGACCCCGGCCTCGATCCTGGTGCTGATGGAGGTGATCGGCGATCTCCTGCCGCCCG
GCGTGCTCAACGTAGTGAACGGCTTCGGGCTTGAGGCAGGCAAGCCGCTGGCCAGCAATCCGCGCATCGCCAAGATCGCC
TTCACTGGCGAAACCACCACCGGCCGGCTGATCATGCAGTACGCCAGCCAGAACCTGATCCCGGTGACGCTGGAGCTGGG
CGGCAAATCGCCCAACATCTTCTTTGCCGATGTCATGGCCGAAGACGATGACTTTCTCGACAAGGCAGTGGAAGGTTTCG
TGCTGTTTGCCTTCAACCAGGGCGAGGTCTGTACCTGCCCGTCGCGCGCGCTGATCCAGGAATCGATCTACGACACATTC
ATGGAAAAGGCGCTCAAGCGCGTGGCGGCGATCAAGCAGGGCAACCCGCTGGATCCCAACACCATGGTCGGCGCGCAGGC
TTCCAGCGAGCAGCTGGAGAAGATTCTGTCCTACATCGACATCGGCAAGCAGGAGGGCGCCGAAATCCTGATCGGTGGCG
AGCGCAACATGCTCGACGGGGAGCTATCGGACGGTTTCTATGTCAAGCCCACGGTGTTCAAGGGCCACAACAAGATGCGC
GTGTTTCAGGAAGAAATCTTCGGCCCGGTGGTGTCGGTGACCACCTTCAAGGACGAGGCCGACGCGTTGGCGATCGCCAA
CGACACCTTGTACGGATTGGGCGCCGGCGTGTGGAGCCGCGATGCCTCGCGCCTGTACCGCATGGGCCGCGCGATCCAGG
CCGGCCGCGTGTGGACCAACTGCTACCACGCCTATCCCGCGCACGCCGCCTTCGGTGGCTACAAGCAGTCGGGCATCGGC
CGCGAAAACCACAAGATGATGCTCGACCATTACCAGCAGACCAAGAACCTGCTGGTGAGCTATTCGCCGAAGGCGCTGGG
GTTCTTCTGA

Protein sequence :
MNALPSAKSLNTDPQSIFKPRYDNFIGGAWVAPQGGQYFDNTTPITGKVFTSIARSTAPDIEAALDAAHAAKEAWGKTST
TDRSNVLLKIADRIEQNLELLAYAETWDNGKPVRETLNADVPLCVDHFRYFAGAIRAQEGGISEIDSDTIAYHFHEPLGV
VGQIIPWNFPLLMACWKLAPALAAGNCVVMKPAEQTPASILVLMEVIGDLLPPGVLNVVNGFGLEAGKPLASNPRIAKIA
FTGETTTGRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDFLDKAVEGFVLFAFNQGEVCTCPSRALIQESIYDTF
MEKALKRVAAIKQGNPLDPNTMVGAQASSEQLEKILSYIDIGKQEGAEILIGGERNMLDGELSDGFYVKPTVFKGHNKMR
VFQEEIFGPVVSVTTFKDEADALAIANDTLYGLGAGVWSRDASRLYRMGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIG
RENHKMMLDHYQQTKNLLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-153 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-159 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-159 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-159 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-158 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_001901516.1 aldehyde dehydrogenase VFG0082 Protein 1e-153 65