Gene Information

Name : Rpic_0961 (Rpic_0961)
Accession : YP_001898541.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1017598 - 1018326 bp
Length : 729 bp
Strand : +
Note : KEGG: rso:RSc1118 probable lipoprotein releasing system ATP-binding ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGTGAGGCCGTCATGACTTCGATGGAAGCGCCTGCCGCGGCGCCGCAGGGTGGGGTGGTGCAAGCCGAAGGGCTGTC
CAAGTCGTTCCGCCAGGGCGGGTTGAACGTCGACGTGCTCAAGGGCGTGGATATCCGCATCGGCGTGGGCGAGAAGGTCG
CCATCGTCGGCGCCTCCGGTTCGGGCAAGAGCACGCTGCTGCATGTGCTGGGCGGGCTGGATGAGCCGACGTCGGGCCGC
GTCTCTCTGCTCGGCAAGCCCTTCACCGCCATGAAAGAGCGCGAGCGCAACACGTTGCGCAACCAGGCGCTGGGCTTTGT
CTATCAGTTCCACCATCTGCTGCCCGAATTCACCGCGCTGGACAACGTCGCGATGCCACTGCGTATCCGGGGCGTGGAAG
AAGCGCAAGCGCGCCACACCGCACAGGCGATGCTCGAACGCGTGGGTCTGGGCCCGCGCACGGCACACCGTCCGGGTGAG
CTGTCCGGCGGCGAGCGTCAGCGCGTGGCGATTGCGCGCGCGCTGGTCGGGTCTCCGGCTTGCGTGCTGGCTGACGAGCC
TACCGGCAACCTTGACGATCACACCGCTGGTGAAGTGTTTGACCTGATGCTGGAACTCACGCGCACGCTGGGCACGAGCT
TTGTCATCGTCACGCACGATATCGAACTGGCCGGCCGCTGCGACCGCATCTTCCGCCTGCGGGACGGCCATCTGCACCAG
GAGCGCTAA

Protein sequence : 
MSEAVMTSMEAPAAAPQGGVVQAEGLSKSFRQGGLNVDVLKGVDIRIGVGEKVAIVGASGSGKSTLLHVLGGLDEPTSGR
VSLLGKPFTAMKERERNTLRNQALGFVYQFHHLLPEFTALDNVAMPLRIRGVEEAQARHTAQAMLERVGLGPRTAHRPGE
LSGGERQRVAIARALVGSPACVLADEPTGNLDDHTAGEVFDLMLELTRTLGTSFVIVTHDIELAGRCDRIFRLRDGHLHQ
ER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_0961 YP_001898541.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 1e-33 45
Rpic_0961 YP_001898541.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-40 45