Gene Information

Name : Rpic_0837 (Rpic_0837)
Accession : YP_001898419.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 885894 - 887570 bp
Length : 1677 bp
Strand : -
Note : TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rso:RSc0981 putative L-lactate permease transmembrane protein

DNA sequence :
ATGTGGAATCAAGTCTATGACCCGCTCGGCAGTGCCGTGTGGTCAACCCTAGCGGCCGGGATACCGGTGGCGGTACTGCT
GTGCTCGCTGGCGTTCTTCCATATGCAGGCGCATCTGGCAGCCGGCCTGGCGCTGATTGTCGGGGTGGGGATCGCCTCGT
TTGTGTTTGGCATGCCGACCGCAATGGCTGGCAAGGCTGCGGGCCTCGGCATCGTCTCGGGCCTGTTCCCAATTGGCTGG
ATTGTTCTCAACATCATCTTCCTGCACCGGCTCACCACCTTGAACGGGTCGTTCAAGGTCTTGCAGAGCTCGATTTCCGG
CATTACCGAAGACCGCCGCCTGCAGCTGCTGCTGGTAGCGTTCAGCTTTGGCGCGTTCTTTGAAGGCGCCGCGGGCTTCG
GCACGCCGGTGGCCGTCACGGGCGCCATCCTGATCGGCCTGGGCTTCTCGCCACTGGCCGCGTCGGGCCTGGCCCTGATC
GCCAACACCGCACCGGTGGCCTACGGCGCGCTGGGTGCCCCGCTCATCGGGCTGGCTTCGGTCACGGGGCTGGACCTGCT
GCAGCTCTCTGCCATGGTTGGCCGCCAGTTGCCGTTCTTCTCGGTGCTGGTGCCGTTCTGGCTGATCTGGGCGTTCGCGG
GCTTCCGCGGCATGCTGCAGATCTGGCCAGCAATCCTGGTGGCGGGCGTGTCGTTTGCGATTCCGCAGTTCCTGGTGTCG
AACTTCCACGGCCCGTGGCTGGTGGACGTGATTGCGGCGCTGGTGTCGATGGGCACGCTCACGCTGTTCCTGAAGGTGTG
GAAGCCCAAGACGATCTGGACCTCGACCGCCCTGCGCAACCGCGAAGACAACTCCCGCGTCGACCCCGAAGCTGCTGCCG
AAGCCCGCGAAACCACCACGGCCACCAACGGCAAGATCACGCGCGTGCAGGCATGGTTGCCGTGGGTCATCCTGACCGTG
TTCGTGTTCATCTGGGGCGTGCCGCAGTTCAAGGCGTTTGCCGACGGCCTCTGGGCATTCAAGTTCGCCATCCCGGGCCT
CGACAAGATGGTGCTCAAGGGCCCGCCGGTGGTGCCCAAGGTGATTGCCGAAGGCGCAGTGTTCAACTTCAACGTCCTGT
CGATGGCGGGTACGGGCATCCTGGTATCGGCCATCGTCGGCGGCCTGCTGATGGGCTACTCGCTGCCGCGCATGCTCAAG
GAGTACTGGAACACCATCAAGCTCACGCGCTATTCGCTGCTGACGATCTGCGCGATGTTCGGCATCGGCTACCTGACGCG
CTACTCCGGTCTGGACGCGACGCTGGGCCTGGCCTTCGCCCACACGGGCGTGCTGTACCCGCTGTTCGGCACGATGCTGG
GCTGGCTGGGCGTGGCGCTCACCGGCTCCGATACGGCATCGAACGTGCTGTTCGGCGGCCTGCAGAAGACCACGGCCGAA
CAGCTTGGCCTGTCGCCGATCCTCATGTCGGCGGCCAACAGTTCGGGCGGCGTGATGGGCAAGATGATCGACGCGCAGTC
CATCGTCGTGGCTTCCACCGCCACCAAGTGGTACGGCCACGAGGGCGACATCCTGCGCTACGTGTTCTTCCACTCGCTGG
CGCTGGCCTTCCTGGTGGGGCTGATGATCACCCTGCAGGCTTATGTGGAGCCGTTCTCGCGGATGGTGGTGCACTGA

Protein sequence :
MWNQVYDPLGSAVWSTLAAGIPVAVLLCSLAFFHMQAHLAAGLALIVGVGIASFVFGMPTAMAGKAAGLGIVSGLFPIGW
IVLNIIFLHRLTTLNGSFKVLQSSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI
ANTAPVAYGALGAPLIGLASVTGLDLLQLSAMVGRQLPFFSVLVPFWLIWAFAGFRGMLQIWPAILVAGVSFAIPQFLVS
NFHGPWLVDVIAALVSMGTLTLFLKVWKPKTIWTSTALRNREDNSRVDPEAAAEARETTTATNGKITRVQAWLPWVILTV
FVFIWGVPQFKAFADGLWAFKFAIPGLDKMVLKGPPVVPKVIAEGAVFNFNVLSMAGTGILVSAIVGGLLMGYSLPRMLK
EYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTAE
QLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSLALAFLVGLMITLQAYVEPFSRMVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 3e-97 47