Gene Information

Name : Rpic_0664 (Rpic_0664)
Accession : YP_001898247.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 704916 - 706028 bp
Length : 1113 bp
Strand : -
Note : KEGG: rso:RSc0715 probable riboflavin biosynthesis bifunctional RibD : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: C

DNA sequence :
ATGTTCTCCGACTTCGACCACGCCATGATGCAGCGCGCCCTGGCGCTGGCCGAGAAGGGCTTGTTCACCACCACGCCCAA
CCCGCGCGTCGGATGCGTGATCGTGCGAGACGACACCGTCATCGGCGAGGGCTACACGCAACCCGCCGGACAGGACCACG
CTGAAATCCAAGCCATCAAGGATGCTCAGTCGCGCGGCCAGGACGTGCGCGGCGCCACCGCCTATGTGACGCTGGAGCCC
TGCAGCCACTTTGGCCGCACCCCGCCCTGCGCGGATCGTCTCGTCGAAGCGGGGATCACCCGCGTGGTGGCGGCCATGGA
AGATCCAAACCCCGCTGTCTCCGGACGCGGCTTGCAGAAGCTGCGCGATGCCGGGGTCGACGTGCGCTGCGGGCTGCTGG
AGCGGGAGGCGCGTGAGCTGAACATCGGTTTCGTTTCGCGCATGACGCGCGGCACGCCCTGGGTGCGTGTGAAGGTCGGC
GCTTCGCTGGACGGCCGCACCGCGCTGGACAACGGCATCAGCCAGTGGATTACCGAAACCGAGGCGCGCAACGACGGCCA
CCGCTGGCGCGCGCGCGCCTGTGCCATCCTCACCGGTATCGGCACGGTGCGCGAAGACAATCCGCGACTGACCGTGCGCG
CCATCAACACGCCGCGCCAGCCTCGCCGCGTGCTGATCGACTCGGCGCTGGACGTGCCACTCGACGCCCACATCCTCACC
GCAGATGGGCACCACGAGCCGACGCTCATTTTTGCCGCTCAACCCGAAGCTGGCCGCATGCGTGCGTTGAGCGAGCGCGG
CGCGGAGGTCATCCTGCTGCCGAACGCCGCAGGAAAAGTCGATCTGGCCGCAGTCCTGCGCGAACTGGGTCGCCGCGAAA
TCAACGAGCTGCACGTCGAAGCCGGCTTCAAACTCAACGGCTCGCTGCTGCGCGAAGGGCTGGTTGACGAGATCCTCGTC
TATCTGGCACCCAAGGTGCTCGGCTCGGGCCAGGGCATGTTCAATATGGGGCCGCTGCAGACGCTGGAAGGCGCGGCCGA
ATTCTTCTTTCACGATATCTCGCGCATCGGGGGCGATCTCCGCATCCTGGCGCGCCGCAACCCGACGGATTGA

Protein sequence :
MFSDFDHAMMQRALALAEKGLFTTTPNPRVGCVIVRDDTVIGEGYTQPAGQDHAEIQAIKDAQSRGQDVRGATAYVTLEP
CSHFGRTPPCADRLVEAGITRVVAAMEDPNPAVSGRGLQKLRDAGVDVRCGLLEREARELNIGFVSRMTRGTPWVRVKVG
ASLDGRTALDNGISQWITETEARNDGHRWRARACAILTGIGTVREDNPRLTVRAINTPRQPRRVLIDSALDVPLDAHILT
ADGHHEPTLIFAAQPEAGRMRALSERGAEVILLPNAAGKVDLAAVLRELGRREINELHVEAGFKLNGSLLREGLVDEILV
YLAPKVLGSGQGMFNMGPLQTLEGAAEFFFHDISRIGGDLRILARRNPTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-59 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-59 44