Gene Information

Name : Rpic_0465 (Rpic_0465)
Accession : YP_001898052.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 497784 - 499514 bp
Length : 1731 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B1980 Na+/solute symporter

DNA sequence :
ATGAAGAAGATGCTTTCGATCCTGCTGGTGGCGCTACTGGCCGCTGGCGCCTGCGGGGCGGCTCTGGCTGCCGGCGGCGA
TGTCGGACAGACCGCCAAGCAGGAAACCAACACCACGGCCATCGTTCTGTTTGCTCTGTTCGTGGCCGGCACGCTGTGGA
TCACGAAGTGGGCGGCCAAGCGTACGCGGTCCGCGGCCGATTTCTACACGGCGGGCGGCGGCATCACCGGCTTCCAGAAT
GGCCTGGCCATTTCGGGCGACTACATGTCGGCAGCGTCCTTCCTCGGTATTTCCGCGGCCGTGATGACCTCCGGCTACGA
CGGCCTGATCTACTCCATCGGCTTTCTGGTCGGCTGGCCGATCATCACGTTCCTGATGGCCGAGCGGCTGCGCAACCTTG
GCAAGTTCACCTTTGCAGACGTGGCAGGCTACCGGTTCGAGCAAGGCCCGATCCGCAGCTTTGCCGCGGTTGGCACGCTG
GTGGTGGTGGCGTTCTATCTGATCGCTCAGATGGTGGGTGCAGGCCAGCTCATCAAACTGCTGTTCGGGCTGGATTACTG
GATCGCGGTGGTCATTGTCGGCGCGTTGATGATGGTCTACGTGCTGTTCGGCGGCATGACCGCAACCACCTGGGTGCAGA
TCATCAAGGCGTGCATGCTGCTGGCCGGCGTGACGTTCATGGCCATCATGGTGCTGGCGCAGTACGGTTTCAGTCTGGAG
GCGTTGTTCGCCAAGGCTGTGCAGGTCAAGACCGCCATTGCAGCCAATGCCGGCAAATCGCCCGATGAGGCCGCCAAGAT
CGGTCTGTCGGTGATGGCGCCGGGTGGCTTCATCAAGGACCCGATCTCGGCCATCTCGTTCGGCATGGCGCTGATGTTCG
GCACCGCCGGTCTGCCGCACATCCTGATGCGTTTCTTCACGGTCCCGGATGCCAAGGAGGCGCGCAAATCGGTCTTCTGG
GCGACCACCTGGATCGGCTACTTCTACATCCTGATCTTCATCATCGGCTTTGGTGCGATCACGCTGGTGTTGACGAACCC
CGAACTGTCCGACGTGGCCAAGGGTGTCATCAAGGGCGGCGCGGGCACGGCCAACATGGCTGCGGTGCTGGTGGCCAAGA
CGGTGGGCGGCGATGTGTTCTACGGCTTCATCTCGGCCGTGGCGTTTGCCACGATTCTGGCGGTGGTGGCAGGGCTCACG
CTGTCGGGTGCATCGGCGGTGTCGCATGATCTTTACGCCACGGTCTTCAAGCACGGCAAGGCCAACAGCGCCGACGAGCT
GAAGGTCTCGCGCATCACCACGCTGGTGCTGGGCGTGATCGCTGTGCTGCTGGGCATCGCTTTCGAGAAGCAGAACATCG
CGTTCATGGTGTCGCTGGCGTTTGCGGTGGCGGCATCGGCCAACTTTCCGGTGTTGTTCCTCTCGATGCTGTGGAAGGGC
TGTACCACGCGTGGTGCGGTTATCGGCGGGTTCCTGGGGCTGATCTCGTCGGTGGGTCTGACGATCGTTTCGCCGTCGGT
GTGGGAGGCCACGCTCGGCTATCCGAAGGGCTCGGCGTGGTTCCCGTACACGTCGCCCGCGCTGTTCTCGATGACGATCG
GCTTCGTGGGCGTGTGGCTGTTCTCGGTGCTGGACAGCAGCGTTCGCGCCAAGAACGAGAAGGCGTCGTTTGCCGCGCAG
CAGGTCCGCTCGGAAACGGGCCTCGGTGCGGCTGGCGCATCGGGCCACTGA

Protein sequence :
MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAKRTRSAADFYTAGGGITGFQN
GLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWPIITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTL
VVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE
ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKEARKSVFW
ATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLT
LSGASAVSHDLYATVFKHGKANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG
CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWLFSVLDSSVRAKNEKASFAAQ
QVRSETGLGAAGASGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 8e-116 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-74 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_0465 YP_001898052.1 sodium solute transporter superfamily protein BAC0564 Protein 6e-138 64
Rpic_0465 YP_001898052.1 sodium solute transporter superfamily protein BAC0570 Protein 1e-127 61