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Name : Rpic_3400 (Rpic_3400) Accession : YP_001900953.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3559618 - 3561174 bp Length : 1557 bp Strand : + Note : KEGG: rso:RSc3115 probable general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGGCAACACACGCTTCCACCACCGACGTCAGCACGCTCGAGCCGCCCTCGCAGTCGGCCGTGCGGCTGGTGCCGTATGC GTTTGCGCGCGACGCCAAGTTGCTCGTCGCCCGCCAGGACGTCGACACGCTGGAGGTGTGGGTCTGCCCCGAAACCTCGC GCACGGCGCTGGCCGAACTCGGCCGCGTGTTCGGGTCGCTGCATCTGGTGACGCTCGACGCGGCGGCGCTATCCACCGCC ACGCAGACGGCCTACAACGCGCAAGACGGCAGCGCGGCCCAGGTCGTGGGTGAAGTGGAGGGCGAAGTCGACCTCTCGCG CCTGATGCAGGACATTCCGGCCGTGGAAGACCTGCTCGAATCCGAAGACGACGCGCCGATCATCCGCATGATCAACGCGC TGCTCACGCAGGCCGCGCGCGAAGGCGCCTCGGATATCCACATCGAGCCGTTCGAGAATGCATCCGTCGTGCGCTTTCGC GTCGATGGGACGCTGCGCGACGTGGTGCGCCCGAAGAAAGCGCTGCACGGCGCGCTGATTTCGCGCATCAAGATCATGGC GCAGCTCGACATTGCCGAAAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTGGGCGGTCGCCCGGTGGACGTGC GTGTGAGCACCCTGCCCACCGGCCACGGCGAGCGCGCCGTGCTGCGTCTGCTCGACAAGGAAGCCGGCCGGCTCGACCTC GGCAAGCTCGGCATGGGCGCCGGCACCCTGGCGCGCTTCGACCACCTGATCAACCAGCCGCACGGCATCGTGCTCGTCAC CGGCCCCACGGGTTCGGGCAAGACGACCACGCTGTATGCGGCGCTGTCGCGGCTCGACGCGGCGTCCACCAACATCATGA CGGTGGAAGATCCGATCGAATACGACCTCGACGGCATTGGCCAGACGCAGGTCAACCCAAAGATCGACATGACGTTCGCC AAGGCCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGGGAAATCCGCGACCTGGAAACCGCGCAGAT CGCCGTGCAGGCCTCGTTGACGGGCCACCTGGTGCTGGCGACGCTGCACACGAATGATTCCGCATCCGCCGTGACGCGCT TGATCGACATGGGGATCGAGCCGTTCCTGCTGTCTTCATCGCTGCTGGGTGTGCTGGCGCAGCGGCTGGTACGCCGCCTG TGCGTGCATTGCCGCCGCGAAGAAGTGCTCGAACTCACGCCTGCGGAAGTGGAAGCCGTGGCCGGCACGCCCGTGGCCGA TGGTGTGGCACCGGCCACGCCGGCACGCAAATCGGTGTGGCATCACGTCGGTTGCGAGCGTTGCAGCAACTCTGGCTACC AGGGCCGGACCGGCGTGTACGAACTGCTGACCGTCACGCCCGAAATCCAGACGATGATCCACCGCCAGGCCGCTGAATCC GAGATCAAGGCGTTCGCCATCGGCCAGGGCATGCAGACGATGCGCTTGGATGCACAGCGCTGGATCGACACCGGCGCCAC GTCGCTGGAAGAAGTGCTGCGTGTCACACGCGACTAA Protein sequence : MATHASTTDVSTLEPPSQSAVRLVPYAFARDAKLLVARQDVDTLEVWVCPETSRTALAELGRVFGSLHLVTLDAAALSTA TQTAYNAQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFENASVVRFR VDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDL GKLGMGAGTLARFDHLINQPHGIVLVTGPTGSGKTTTLYAALSRLDAASTNIMTVEDPIEYDLDGIGQTQVNPKIDMTFA KALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLIDMGIEPFLLSSSLLGVLAQRLVRRL CVHCRREEVLELTPAEVEAVAGTPVADGVAPATPARKSVWHHVGCERCSNSGYQGRTGVYELLTVTPEIQTMIHRQAAES EIKAFAIGQGMQTMRLDAQRWIDTGATSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-107 | 49 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-107 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-116 | 54 |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-109 | 52 |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-107 | 50 |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG0233 | Protein | 3e-79 | 47 |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG0112 | Protein | 5e-76 | 45 |
| Rpic_3400 | YP_001900953.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-68 | 43 |
