Gene Information

Name : Rpic_3212 (Rpic_3212)
Accession : YP_001900766.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3361192 - 3361893 bp
Length : 702 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RSc2935 putative response regulator transcription regulator protein

DNA sequence : 
ATGCGGATCTTGCTGGTGGAGGATGAGGAAGAATTGGCCGCATGGCTGGCGCGCGCGCTGGCGCAAAGCGGCTTCGTGAT
CGAGCGCGCCGCTGACGGCGTCATCGCGGAAGCCTTCCTGGGCTCCGGAGAATTTGACGCAGTGGTGCTGGACCTGCGCT
TGCCGCGCAAGGATGGCTTTGCCGTGCTGGCCGACATGCGCGCGCGCGACGACCGCACGCCGGTGTTGATCCTCACGGCG
CAGGGCGCACTGGATGAGCGCGTGCGCGGGCTCAATGCCGGCGCGGACGATTTCCTCACCAAGCCGTTCGCGCTGTCCGA
GCTGGAAGCGCGGTTGATGGCGCTTATCCGCCGCAGCCGCGGCCGGGCGTTCCCGCGCCTGCGTTGCGGGCCGCTGGAAT
TCGATACCGGACGCAAGGCATTCCTGCTGTCGGGCGAGCCGCTATCGCTCACGCCGCGCGAGCACGCCGCACTGTCGGCA
CTGCTGCACAAGACCGGCCAGCCGATCAGCAAGGTGCATCTGTTCGACAAGGTCTTCAACCTGGACAGCGATTCCAGCCC
CGACGCAGTCGAGGTGGTCGTGCACCGCCTGCGCAAGAAGCTGGCGGGCACGGGCGTGCAGATCGTCACCGTACGGGGGC
TGGGTTACCTGCTCGAGGCCGGCGATGGTGAAGGGCCCGCCGCCGGCGACAGCAGCGCATGA

Protein sequence : 
MRILLVEDEEELAAWLARALAQSGFVIERAADGVIAEAFLGSGEFDAVVLDLRLPRKDGFAVLADMRARDDRTPVLILTA
QGALDERVRGLNAGADDFLTKPFALSELEARLMALIRRSRGRAFPRLRCGPLEFDTGRKAFLLSGEPLSLTPREHAALSA
LLHKTGQPISKVHLFDKVFNLDSDSSPDAVEVVVHRLRKKLAGTGVQIVTVRGLGYLLEAGDGEGPAAGDSSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-32 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_3212 YP_001900766.1 winged helix family two component transcriptional regulator BAC0487 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_3212 YP_001900766.1 winged helix family two component transcriptional regulator VFG0473 Protein 1e-34 42