|
Name : Rpic_3138 (Rpic_3138) Accession : YP_001900692.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Virulence Product : lytic transglycosylase catalytic subunit Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 3286288 - 3286761 bp Length : 474 bp Strand : + Note : PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2896 hypothetical protein DNA sequence : ATGCCCCTCGCCCGCCCTCTTCGCTTGAACTGCAGCCGCCTTGGCGCGGCGCTTGTGCTGGCCGCCTCCAGCGTTGCTGC GCACGCCGCCTCGGGCGATTGCTTTGAGCAGGCCGGTACCTATCAGGGCGTCAACCCGACGGTGCTGCGCGCCATCGTGT GGTTTGAATCGAAGGGTGATGCGGGCGCCATCCACCGCAACGCAGATGGCTCGGTCGACATCGGCCAGGCGCAGATCAAT TCAATCCACTTCAGCACGCTGGCGCGCTACGGCGTGCCGCGCCGTGCACTGACCGACGCCTGCGTCAACGTGTTCGTAGC GGCCTGGCTGCTCAAGCAGAAGATGGTCCGCCATGGAAATACATGGCGGGCCATCGGCGCGTATCACTCGGAAACGCCTG CCCACCGCGACGCCTATGCGCGCAGCATCCAGCGGGTGCTGATGTCGTGGGGGGAATTGCGGGCCGACCGCTGA Protein sequence : MPLARPLRLNCSRLGAALVLAASSVAAHAASGDCFEQAGTYQGVNPTVLRAIVWFESKGDAGAIHRNADGSVDIGQAQIN SIHFSTLARYGVPRRALTDACVNVFVAAWLLKQKMVRHGNTWRAIGAYHSETPAHRDAYARSIQRVLMSWGELRADR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3001 | YP_244069.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 4e-30 | 58 |
| hpa2 | NP_636615.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 4e-30 | 58 |
| hpaH | YP_362172.1 | transglycosylase HpaH | Virulence | Hrp PAI | Protein | 1e-29 | 57 |
| hpaH | AAL78295.1 | HpaH precursor | Virulence | Hrp PAI | Protein | 8e-30 | 57 |
| hpa2 | AAF61278.1 | Hpa2 precursor | Virulence | Hrp PAI | Protein | 3e-29 | 57 |
| hpa2 | NP_640772.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 8e-30 | 56 |
