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Name : Rpic_3052 (Rpic_3052) Accession : YP_001900607.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Virulence Product : Fis family two component sigma-54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3185553 - 3187178 bp Length : 1626 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rso:RSc2807 probable response regulator transcription regulator protein DNA sequence : ATGTCCAAAGCCGCCATCGTTCGCGAACCCATTCTCGTCGTCGATGACGAAGCCGACCTGCGCGAGCTGCTGGAGATTTC CCTGCGCCGCATGGGGCACGACGTCGTGCTCGCCAGCGGGCTGGCCGAGGCGCGCGAGGCGCTCTCTCGCCAGCGCTTCG CACTTGTGCTGACCGACATGCGCCTGGGCGATGGCCTGGGCATCGAACTCGTGCGCCAGCTTTCTGCCACGGCCGACCGC ACGCCGGTGGCCGTCATCACCGCCTATGGCAGCGCCGAGAACGCGGTGGAAGCGCTCAAGGCCGGCGCGTTCGACTACAT CGCCAAGCCGCTCTCGCTTGATCAGTTGCGCAGCCTCGTGCTCAACGCGCTGGGCCGCCAGCAGCGCGATCCCGACCCGG GCAACGCCGATCTGGCCGAGCGCACCAACGACCTGCTGCCCGGGCATTCCGCTGCGATGCAGGAAGTGCGCCGCTCGCTG ATGCGCCTGGCACGCAGCATGGCGCCGGTGGTGATCAGCGGCGAATCCGGCAGCGGCAAGGAGCGTGCGGCGCGCGCCGT GCATGCGCTGTCTGCGCGTGCATCGCGGCCGTTCGTGGCGGTCAACTGCGGCGCGATTCCCGAGAACCTGATGGAGGCCG AGTTTTTCGGCTACGTGAAGGGCGCTTTTACCGGCGCCGACACTGATCGCCAGGGCTTCTTCCAGGCCGCCAACGGCGGC ACGCTCATGCTCGATGAAGTGGCCGACCTGCCGCTCACCATGCAGGTGAAACTGCTGCGTGCGTTGCAGGAGCGTCGCGT ACGCAAGATCGGCGAAAGCCGTGAAGACCCCGTCGATGTGCGCGTCGTGTGCGCGAGCCACCAGAATCTGGCCCGTCTGG TGGCCGCTGGCCGTTTCCGCGAAGACTTGTTCTACCGCCTGAACGTGCTGGAACTGCGCATGCCCACGCTGCGCGAGCGT GCCGAAGACGTGCCCGTGCTGGCCGGCGTGCTGCTCGAACAGCTCGCCAGCCGCTACGGCGATCCGCGCCCCAAGCGCCT GACGCGACCGGCGCTGCAGCAACTGTGCGCGTATCCGTTCCCGGGCAACGTGCGCGAGCTGGAGAACCTGCTGGAGCGCG CTTACGCCTTTGCGGAAGGCGAGTCGATCGACGTGGACGACCTTGGCGCGCTGGGAGCCGAGATCGAACGCTCGCCGCTG TTCCACCGCACGCGCGAGGCGCAGGCTGCCGCAGCGGCCCATCACCCGATGTCGCCGGCGCCGATGACGAGTTGGCCTGA TGCCGTCTACATGCCGGCGCCGGTGCCAAGCCCCTTGGGGATGCCGCAACCGGTCGCACAGCCCGAGCCGGCACCCGTTG CGCAGCCGGCGGAGCCGGCCCTGCCGAGCGTTTCGCTGCCGATCGATCTGCCGGCCTACCTGGAGTCGGTCGAGCGCAAC GTGATCCTGGCCGCGCTGGACCAGACCGGCTTCAACCGTACGGCGGCCGCCAAGCTGCTTGGGCTGTCATTCCGCCAGTT GCGCTATCGCATGCAGCAGCTTGGCATTCGTGATCCGCGGGACGTTGAAGCGTCGCCGGGCAGCGTCGGTGAACCGGCCG GAAATGGGCTGAACGGCGATGCCTGA Protein sequence : MSKAAIVREPILVVDDEADLRELLEISLRRMGHDVVLASGLAEAREALSRQRFALVLTDMRLGDGLGIELVRQLSATADR TPVAVITAYGSAENAVEALKAGAFDYIAKPLSLDQLRSLVLNALGRQQRDPDPGNADLAERTNDLLPGHSAAMQEVRRSL MRLARSMAPVVISGESGSGKERAARAVHALSARASRPFVAVNCGAIPENLMEAEFFGYVKGAFTGADTDRQGFFQAANGG TLMLDEVADLPLTMQVKLLRALQERRVRKIGESREDPVDVRVVCASHQNLARLVAAGRFREDLFYRLNVLELRMPTLRER AEDVPVLAGVLLEQLASRYGDPRPKRLTRPALQQLCAYPFPGNVRELENLLERAYAFAEGESIDVDDLGALGAEIERSPL FHRTREAQAAAAAHHPMSPAPMTSWPDAVYMPAPVPSPLGMPQPVAQPEPAPVAQPAEPALPSVSLPIDLPAYLESVERN VILAALDQTGFNRTAAAKLLGLSFRQLRYRMQQLGIRDPRDVEASPGSVGEPAGNGLNGDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 9e-80 | 48 |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 9e-80 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic_3052 | YP_001900607.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1214 | Protein | 1e-92 | 57 |
| Rpic_3052 | YP_001900607.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG0116 | Protein | 4e-55 | 42 |
| Rpic_3052 | YP_001900607.1 | Fis family two component sigma-54 specific transcriptional regulator | VFG1249 | Protein | 2e-53 | 41 |
