Gene Information

Name : Rpic_2955 (Rpic_2955)
Accession : YP_001900510.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 3076606 - 3078753 bp
Length : 2148 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGCCCGACGCTGATACTGCGCCGGCGCCGAAGCCAAAACGCGCGGCCACGGCAGACAAGCCAGCCAAGGCAACGGCCAA
AACTGCCCGCCCAGCAGACAAGCTCGCCAAGCTCGGCCTGCACCGCGACGTCGATCTCGTCCTCCATCTGCCGATGCGCT
ACGAGGATGAAACCACGCTGCTGACCATTGCCGAGGCCACGGCCCGCGCCAACACCGGCTGGGCTGCGCAGGTGGAAGGC
ACGGTCACGCGCAATGAAGTGGCGTTTCGGCCGCGTCGGCAGCTCGTCGTGCATATCGCCGATGACTCGGGCGAGCTGGT
CCTGCGCTTTCTCAATTTCTACGGCAGCCAGGTCAAGCAGATGGCCGAAGGCGTGCGCCTGCGCGTGCGCGGCGAAGTGC
GCGGCGGCTTCTTCGGCGCCGAGATGGTGCACCCGACCGTGCGCGCCGTGGCGGACGATGAGCCGCTGCCCGATCGCCTG
ACACCGGTGTATCCGAGCACGGCCGGCGTGGCGCAGGCCTATCTGCGCAAGGCGATCCTGAACGCGCTCACGCGCACGCC
GCTGCCGGAAACGCTGCCGAACAGCCTCGTCACCGGCCCGCTCGCGCCGCTCAAGCTGATGACGCCGGCCGACGCCGTGC
GCCTGCTGCATCAGCCGATGCCCGATGTCGATGAGCACAGCCTCGTCGAGCGCACGCACCCGGCGTGGCTGCGCATCAAG
TTTGATGAACTACTGTCGCAGCAGTTGTCGCTCAAGCGTGCGCAGGCCGCGCGCCGCATGCGCAACGCGCCCATCCTGCG
CGACAGCGGCAAGGATGGGCTGCTCGCGCGCTTCATGGATGCGCTGCCGTTCAAGCTGACCGGCGCCCAGGCCCGCGTGT
GGGAAGAGATTCGCGCCGATCTCGCGCACCCGTACCCGATGCAGCGGTTGCTGCAGGGCGATGTGGGCAGCGGCAAGACC
GTCATTGCCGCGCTGGCAGCCTGCCAGGCCATCGATGCGGGCTGGCAGGCGGCGCTGATGGCGCCGACAGAACTGTTGGC
CGAGCAGCACTATCGCAAGCTTTCTGCGTGGCTCGAACCGCTTGGCGTGGACATCGTCTGGCTGGCCGGCAGCCTCAAGC
GCAAGCAGAAGGACGAGGCGGCGGCGCGCGTGGCGGCCGGCACGGCGCAACTCGTGATCGGTACGCACGCGCTGATCCAG
GATGCGGTCACGTTCGCGCGGCTCGGCCTGGCGGTGGTCGATGAACAGCATCGCTTCGGCGTGGCGCAGCGGCTCGCCCT
GCGCGGCAAGGCGAGCAACGGCGACGGCCCCGCCGCCAACGTCCAGGTGCCGCACCAACTGATGATGTCCGCCACGCCGA
TCCCGCGCACGCTGGCGATGACGTATTACGCCGATCTCGACGTCTCTGCCATCGACGAGTTGCCGCCCGGCCGCACGCCC
ATCGTGACGCGCCTGGTCAACGATGCGCGGCGCGACGAAGTGATTGAACGCATCTACGCCGCAGCACGCGAAGGGCGACA
GGTCTACTGGGTTTGCCCGCTGATCGAGGAAAGCGAAGCGCTGCAATTGCAGACCGCCGTTGAAACCTTCGAGACGCTTT
CGCAAAGTCTGCAAGGCCTGAAGGTGGGCCTCGTGCATGGACGCCTGCCATCGGCCGAGAAGGCCGCCGTGATGAGCGCC
TTCGCCGGCGGCGACCTGCACGTGCTGGTGGCCACCACCGTCATCGAAGTGGGCGTGGACGTGCCCAATGCCTCATTGAT
GGTGATCGAGCACGCCGAGCGCTTTGGCCTTGCGCAACTGCATCAACTGCGCGGGCGGGTGGGGCGCGGCACGGCGGAAT
CGGTCTGCGTGCTGCTGTATCAGGCGCCACTGTCCCCGACGGCCAAGCAACGCCTGCAGACCATGCGCGAGACCACCGAC
GGTTTCGAAATCGCCCGGCGCGATCTGGAGATCCGCGGCCCTGGCGAGTTCCTGGGGGCGAGGCAATCGGGCGAAGCGAT
GCTGCGCTTTGCCGACCTGAACCAAGATGCGTGGCTCGTCGAGTTTGCGCAGGGCACCGCGGACGAGATGCTCGCGCGCT
TTCCTGAAGCCGTCGACACCCATCTCAAGCGCTGGCTGGGCGAGCGCGAGCACTACCTGCGTGTTTAA

Protein sequence :
MPDADTAPAPKPKRAATADKPAKATAKTARPADKLAKLGLHRDVDLVLHLPMRYEDETTLLTIAEATARANTGWAAQVEG
TVTRNEVAFRPRRQLVVHIADDSGELVLRFLNFYGSQVKQMAEGVRLRVRGEVRGGFFGAEMVHPTVRAVADDEPLPDRL
TPVYPSTAGVAQAYLRKAILNALTRTPLPETLPNSLVTGPLAPLKLMTPADAVRLLHQPMPDVDEHSLVERTHPAWLRIK
FDELLSQQLSLKRAQAARRMRNAPILRDSGKDGLLARFMDALPFKLTGAQARVWEEIRADLAHPYPMQRLLQGDVGSGKT
VIAALAACQAIDAGWQAALMAPTELLAEQHYRKLSAWLEPLGVDIVWLAGSLKRKQKDEAAARVAAGTAQLVIGTHALIQ
DAVTFARLGLAVVDEQHRFGVAQRLALRGKASNGDGPAANVQVPHQLMMSATPIPRTLAMTYYADLDVSAIDELPPGRTP
IVTRLVNDARRDEVIERIYAAAREGRQVYWVCPLIEESEALQLQTAVETFETLSQSLQGLKVGLVHGRLPSAEKAAVMSA
FAGGDLHVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCVLLYQAPLSPTAKQRLQTMRETTD
GFEIARRDLEIRGPGEFLGARQSGEAMLRFADLNQDAWLVEFAQGTADEMLARFPEAVDTHLKRWLGEREHYLRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-100 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2955 YP_001900510.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-144 54