Gene Information

Name : Rpic_2749 (Rpic_2749)
Accession : YP_001900305.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2861297 - 2861500 bp
Length : 204 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: bvi:Bcep1808_5778 phage transcriptional regulator, AlpA

DNA sequence :
ATGACCGCAAACATCCAAGCCGCACTGACCATCCTGCGCCGCAGGCAGGTGGAAGCCGCAACCGGGCTCTCGCGCTCGAG
CATCTACCAACGCATCAAGGAAAGGACCTTTCCCGCTGCGGTCCAGCTAGGCCCGCGGGCTGTCGGCTGGCGAGCCGGCG
ACATTGAGGCGTTCTTGGCAAACCCCGCCGGATATAAGGCATAA

Protein sequence :
MTANIQAALTILRRRQVEAATGLSRSSIYQRIKERTFPAAVQLGPRAVGWRAGDIEAFLANPAGYKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 6e-08 50
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-07 45
unnamed CAA21398.1 - Not tested HPI Protein 1e-06 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 8e-07 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-07 43
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2749 YP_001900305.1 phage transcriptional regulator AlpA VFG1141 Protein 8e-08 45