Gene Information

Name : Rpic_2611 (Rpic_2611)
Accession : YP_001900170.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2726555 - 2727379 bp
Length : 825 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: dac:Daci_0468 protein of unknown function DUF932

DNA sequence :
ATGCTTGCAACCCGTTTCGCCTCCCACTCCCCGACGCTGCGCAGCGACTACCCGCTGTCGGATGACCAGATTCGCAGGGT
GGCCCCGTCCATCTTCGCGGATGCCCCGCATGAGAGCCGTTCCGAGCGGTACGCCTACATCCCCACGGCTGCGGTTCTGA
CCGAACTGCGCAAGGAGGGGTTTCAGCCCTTCATGGTGACGCAGACCCGCGTGCGCGATGAAGGCAAGCGCGAGCACACC
AAACACATGCTGCGTCTGCGCCACGCCAGCCAGATCAACGGCGCGGAAGCTAACGAGATTGTGCTGCTGAACTCGCACGA
TGGCACGAGCAGCTATCAGATGCTGGCGGGCCAGTTCAGGTTCGTTTGCAGCAATGGCCTTGTTTGTGGTGACACGGTGG
CCGATGTGCGCGTGCCCCACAAAGGCGACGTGGCCGGACTGGTGATCGAAGGCGCGTATCAGGTACTGAGCGGCTTTGAC
CGCGTGCGCGATTCCCGCGATGCCATGCGCGCAATCACCTTGGACGATGGTGAATCCGAAGTGTTCGCCCGCGCCGCGCT
GGCACTCAAGTACGACGACCCGAACAAGCCCGCGCCCGTCACGGAATCGCAAATCCTGATGCCGCGCCGGTTTGAAGACC
GCCGCCCCGACCTGTGGAGTGTGTTCAACCGCACGCAGGAGAACTTGACCAAGGGCGGATTGCATGGCCGCAGCAGCAAT
GGACGCCGCCAGAGCACCCGGCCCGTGCAGGGCATTGATTCCGACATTCGACTGAACCGCGCCCTGTGGCTGCTGGCCGA
TGGCATGCGCGCCCTCAAAGCTTAG

Protein sequence :
MLATRFASHSPTLRSDYPLSDDQIRRVAPSIFADAPHESRSERYAYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREHT
KHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGQFRFVCSNGLVCGDTVADVRVPHKGDVAGLVIEGAYQVLSGFD
RVRDSRDAMRAITLDDGESEVFARAALALKYDDPNKPAPVTESQILMPRRFEDRRPDLWSVFNRTQENLTKGGLHGRSSN
GRRQSTRPVQGIDSDIRLNRALWLLADGMRALKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-104 77
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-105 77
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-70 55
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 4e-68 54
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 7e-70 54
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-70 54
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 8e-72 54
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-70 54
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-68 53
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-68 53
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-69 53
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-68 53
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 3e-69 53
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 6e-69 53
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 3e-69 53
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 6e-69 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 3e-69 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2611 YP_001900170.1 hypothetical protein VFG1526 Protein 4e-70 54
Rpic_2611 YP_001900170.1 hypothetical protein VFG1676 Protein 2e-68 54
Rpic_2611 YP_001900170.1 hypothetical protein VFG0658 Protein 3e-69 53
Rpic_2611 YP_001900170.1 hypothetical protein VFG1615 Protein 1e-68 53