Gene Information

Name : Rpic_2550 (Rpic_2550)
Accession : YP_001900110.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2655890 - 2656480 bp
Length : 591 bp
Strand : -
Note : PFAM: Resolvase domain; KEGG: bpd:BURPS668_2984 putative site-specific recombinases, DNA invertase Pin

DNA sequence :
ATGTTGTACGGATACGCCCGAGTCTCGACGCAAGAACAAGAGACTCACGCACAAACCGACGCACTGTTTCGAGCAGGCGT
CGGTTTTATTTTTTCCGAAAAAAAAAGCGGTGGAAGCACGGTAGGTAGACCAGAGCTAGAAAAGCTGCTCCGCTTGCTCA
AGCGTGGCGACACCGTCGTCGTCTACAAGCTAGACCGCATCGCGCGATCGCTAAAAGACCTGCTGCGCATCATCGAACGG
ATAGAAGAAAAGGGCGCACAGTTCCGATCGCTGACCGAGTCGCTCGACACCACAACACCAGCAGGCCGCATGCTATTTCA
CATGGTCGGCGCATTCGCAGAGTTTGAGCGAGAACTCATTCGCGAACGCACCAAAGCAGGCATGGCCGCAGCGGTAAAGC
GAGGCGTCAAACTCGGCAGGCACTACGCAATGAGCAGAGAAGACGAAGCCGAAGCGCTTCGCCTCTGGTACGAAGGCAAA
ATGACCCGAACAGCAATTGCACGCAAGTTCGGCGTCCATCTCAGCAGCATCAAGCGTGCAATTAAACGCCACCAAGCCAC
CATCCAACCAAGCCTACTAGACGCAGCATGA

Protein sequence :
MLYGYARVSTQEQETHAQTDALFRAGVGFIFSEKKSGGSTVGRPELEKLLRLLKRGDTVVVYKLDRIARSLKDLLRIIER
IEEKGAQFRSLTESLDTTTPAGRMLFHMVGAFAEFERELIRERTKAGMAAAVKRGVKLGRHYAMSREDEAEALRLWYEGK
MTRTAIARKFGVHLSSIKRAIKRHQATIQPSLLDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-18 45
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 9e-19 45
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-18 45
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-24 44
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-24 44
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-24 44
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-24 44
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 6e-20 43
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 6e-18 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 6e-18 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 9e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2550 YP_001900110.1 resolvase domain-containing protein VFG1030 Protein 3e-18 41