Gene Information

Name : Rpic_2498 (Rpic_2498)
Accession : YP_001900062.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2613323 - 2614843 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase_; KEGG: rme:Rmet_5128 aldehyde dehydrogenase

DNA sequence :
ATGCGTTACGCTCATCCCGGCACTCCCGGCGCCATCGTTTCGTTTAAGCCGCGCTATGGCAATTTCATCGGTGGCGAATT
CGTGTCGCCGGTCAAGGGCCAGTACTTCACCAACACGACCCCGGTGACGGGCGAGGTGATCGGCGAGTTCCCGCGCTCGA
CCGCTGAAGACATCGACCGCGCGCTCGACGCCGCGCATGCTGCCGCTGACGCCTGGGGCCGCACCTCGGTGCAGGACCGC
TCGCTGATCCTGCTGAAGATTGCCGACCGCATCGAGCAGAACCTCGAACTGCTGGCCGTGACCGAAACGTGGGACAACGG
CAAGCCCGTGCGCGAAACGCTGAATGCCGACATCCCGCTGGCCGTGGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CGCAGGAAGGCTCCGCTGCCGAGATCAACGAACACACCGTGGCGTATCACATCCACGAGCCGCTGGGCGTGGTCGGCCAG
ATCATCCCGTGGAATTTCCCGCTGCTGATGGCTGCATGGAAGCTGGCGCCCGCACTGGCTGCCGGCAACTGCGTGGTCCT
CAAGCCGGCCGAGCAGACGCCGCTGGGCATCTGCGTGCTGATGGAGCTGATTGGCGATCTGCTGCCGGCGGGCGTGCTCA
ATGTCGTGCACGGCTACGGCAAGGAAGCCGGCGAGGCACTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTTACGGGC
TCGACGCCGGTCGGCTCGCACATCATGAAGTGCGCGGCCGAAAACATCATTCCGTCAACGGTGGAGCTGGGCGGCAAGTC
GCCCAACATCTACTTCGAAGACATCATGCAGGCCGAGCCGAGCTTCATCGAAAAGGCCGCCGAAGGCCTGGTGCTGGGCT
TCTTCAACCAGGGCGAGGTGTGCACGTGCCCGTCGCGCGCGCTGGTGCAGGAATCCATCTACAGCCGTTTCATGGATGCG
GTGTTGACCAAGGTGGCCGCCATCAAGCGCGGTGACCCGCTCGACACCGACACGATGGTCGGCGCGCAGGCTTCGGAGCA
GCAGTTCTACAAGATCCGCAGCTACCTGGAGATCGCGCAGGAGGAAGGCGCCGAATGCCTGGTCGGCGGCGATGTGGAAG
TGCTGCCCGGCAATCTGTCGAAGGGTTACTACATCAAGCCGACGCTGCTCAAGGGTGACAACAGCATGCGCGTGTTCCAG
GAAGAGATCTTCGGCCCGGTGATTGCCGTGACCACCTTCAAGGACGAAGCGCAGGCGCTGCAGATTGCCAACGACACCGA
CTTCGGCCTGGGCGCCGGTCTGTGGACGCGCGACATCAACCGCGCCTACCGCGTGGGCCGTGCCATCAAGGCAGGCCGCG
TGTGGACGAACTGCTACCACCTGTATCCGGCGCACGCAGCGTTCGGTGGCTACAAGAAGTCGGGCGTGGGCCGCGAGACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACACCAAGCCGCTGGGCTTCTTCTG
A

Protein sequence :
MRYAHPGTPGAIVSFKPRYGNFIGGEFVSPVKGQYFTNTTPVTGEVIGEFPRSTAEDIDRALDAAHAAADAWGRTSVQDR
SLILLKIADRIEQNLELLAVTETWDNGKPVRETLNADIPLAVDHFRYFAGCIRAQEGSAAEINEHTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGICVLMELIGDLLPAGVLNVVHGYGKEAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIYFEDIMQAEPSFIEKAAEGLVLGFFNQGEVCTCPSRALVQESIYSRFMDA
VLTKVAAIKRGDPLDTDTMVGAQASEQQFYKIRSYLEIAQEEGAECLVGGDVEVLPGNLSKGYYIKPTLLKGDNSMRVFQ
EEIFGPVIAVTTFKDEAQALQIANDTDFGLGAGLWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDTKPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-145 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-150 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2498 YP_001900062.1 aldehyde dehydrogenase VFG0082 Protein 2e-145 65