Gene Information

Name : Rpic_2066 (Rpic_2066)
Accession : YP_001899632.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2179151 - 2179444 bp
Length : 294 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase

DNA sequence :
ATGGGAACGAGGCGGCAATTCAGCCGGGAGTTCAAGCTTGAGGCCGTGAGGCTGGTCAAAGAGCGAGGGGTGTCGGTGTC
GCAAGCAGCGCGCGACTTGGACGTGCACGAGAACGTGCTGCGCAAGTGGGTGCGGGAGGCGGCGCAAGACCCTCAGGAGG
CATTCCCCGGCAAAGGGGTGATGAAGCCTGAGCAGGCTGAAATCGAGCGACTGAAGAAGGAAGTGGCGAAGCTCAAGCAG
GAGCGCGACATTCTGAAAAAAGCCGCGGCCTACTTCGCCAAGGACTCACTGTGA

Protein sequence :
MGTRRQFSREFKLEAVRLVKERGVSVSQAARDLDVHENVLRKWVREAAQDPQEAFPGKGVMKPEQAEIERLKKEVAKLKQ
ERDILKKAAAYFAKDSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-15 47
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-15 47
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-15 47
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-15 47
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 6e-15 47
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 9e-15 47
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 6e-15 47
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 9e-15 47
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 1e-10 42
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 9e-11 42
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 9e-11 42
unnamed AAF09021.1 unknown Not tested SHI-O Protein 5e-11 42
unnamed AAF09029.1 unknown Not tested SHI-O Protein 5e-11 42
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-10 42
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 5e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2066 YP_001899632.1 transposase IS3/IS911 family protein VFG1123 Protein 3e-15 47
Rpic_2066 YP_001899632.1 transposase IS3/IS911 family protein VFG1707 Protein 4e-11 42