Gene Information

Name : Rpic_2028 (Rpic_2028)
Accession : YP_001899594.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : dihydropteroate synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0294
EC number : 2.5.1.15
Position : 2134901 - 2135698 bp
Length : 798 bp
Strand : -
Note : KEGG: rso:RSc1527 probable 7,8-dihydropteroate synthase protein; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS

DNA sequence :
ATGGGCATTCTCAACGTCACGCCCGATTCGTTCTCCGATGGCGGGCGGCACGCCACGCGTGATGCAGCGTTGCGCCACGC
CGAGCAGCTGATCACCGAAGGCGTCGACATGATCGACATCGGTGGAGAGTCGAGCCGGCCGGGCGCCGAGCCGTTGAGCC
TGCAAGCCGAGTTGGACCGGGTGATGCCCATCGTCGAGGCGCTACGCGAATGCGGCAAGCCGCTGTCGATCGATACCTAC
AAGCCCGAGGTGATGCGGGCCACGCTGGATGCGGGCGCCGATTTGATCAACGATATCTGGGGTTTTCGCCGGCCTGGCGC
GATCGAGGCGGTGGCAAAGGGCAACGCGGGCCTGTGTGTCATGCATATGCAGCGCGATCCCGAAACGATGCAGGAAGCGC
CCAGCTATGTAGACCTGATGGGCGAGGTGGAGGCCTTCCTGTGCACGCAGACGGAGGCGCTGATGGCTGCCGGCGTGGCG
GCCGAGCGTGTCTCCCTTGATCCGGGGTTTGGTTTTGGCAAGACGCCGGATCACAACCTCACCATGCTCAATCGCTTGGC
GGAGTTTCAGCGCATCGGTTTGCCGCTGCTCGCCGGTTTGTCGCGCAAATCGACGCTGGGCGCGGTGTTGGGCGGCAAAC
CGCCAGCCGAACGTGTGACCGTCAGTGTGGCGGCAGCGCTACTGGCGGCGGAGCGGGGCGCGTTCATCGTGCGTGTGCAC
GACGTGCAGCCGACCTTGGAGGCAATTCAACTCTGGTGGGCCATGCGTCATGAACGCGTAAATCCGCCAATGGCCTGA

Protein sequence :
MGILNVTPDSFSDGGRHATRDAALRHAEQLITEGVDMIDIGGESSRPGAEPLSLQAELDRVMPIVEALRECGKPLSIDTY
KPEVMRATLDAGADLINDIWGFRRPGAIEAVAKGNAGLCVMHMQRDPETMQEAPSYVDLMGEVEAFLCTQTEALMAAGVA
AERVSLDPGFGFGKTPDHNLTMLNRLAEFQRIGLPLLAGLSRKSTLGAVLGGKPPAERVTVSVAAALLAAERGAFIVRVH
DVQPTLEAIQLWWAMRHERVNPPMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sul2 AEA34678.1 dihydropteroate synthase Not tested Not named Protein 2e-34 41
sulI2 AFV47959.1 sulphonamide-insensitive dihydropteroate synthase SulI2 Not tested AbaR25 Protein 2e-34 41
sul2 AEZ06044.1 Sul2, sulphonamide-insensitive dihydropteroate synthase Not tested Tn6167 Protein 2e-34 41
ABK1_0255 YP_005512827.1 Dihydropteroate synthase type-2 Not tested AbaR4d Protein 4e-34 41
BJAB07104_00246 YP_008207711.1 Dihydropteroate synthase-related enzyme Not tested AbaR25 Protein 4e-34 41
BJAB0868_00253 YP_008211579.1 Dihydropteroate synthase-related enzyme Not tested AbaR26 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP002695.1.gene1085. Protein 6e-69 62
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_008702.1.4608834. Protein 8e-60 59
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_002516.2.881715.p Protein 7e-53 51
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP004022.1.gene3451. Protein 8e-55 51
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP000647.1.gene3624. Protein 9e-51 51
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_002695.1.916103.p Protein 2e-52 51
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP000034.1.gene3358. Protein 2e-51 51
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP001138.1.gene3456. Protein 4e-50 50
Rpic_2028 YP_001899594.1 dihydropteroate synthase CP000675.2.gene3019. Protein 3e-47 47
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_011586.7045137.p0 Protein 4e-38 45
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_010410.6003232.p0 Protein 4e-38 45
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_011595.7059722.p0 Protein 4e-38 45
Rpic_2028 YP_001899594.1 dihydropteroate synthase NC_010400.5986775.p0 Protein 1e-37 44
Rpic_2028 YP_001899594.1 dihydropteroate synthase AE016830.1.gene3181. Protein 8e-36 43
Rpic_2028 YP_001899594.1 dihydropteroate synthase AM180355.1.gene1650. Protein 6e-40 42