Gene Information

Name : Rpic_1985 (Rpic_1985)
Accession : YP_001899552.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2094021 - 2094806 bp
Length : 786 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc1568 short chain dehydrogenase

DNA sequence :
ATGGGTTTGTCGATCAATCTGGAAGGCAAGGTCGCGCTGATCACGGGCGCGTCGAGCGGCCTGGGCGCGCGTTTCGCGCA
CACGCTGGCGGCCGCCGGCGCGAAAGTCGTGCTGGCCTCGCGCCGTGTCGAACGGCTGAAAGAACTGCGCGCCGACATCG
AATCGAAGGGCGGCAGCGCCCACGTCGTACGTCTGGACGTGACGGATCCGGACAGCATCCGATCGGCCATCGCCCACGCT
GAAACCGAAGCCGGCACGATCGACATCCTGGTCAACAACTCTGGCGTTTCGACCACGCAGCGCATGGTGGACGTCACGCC
CGATGACTTCGATTTCGTATTTGATACCAACACGCGTGGCGCCTTCTTTGTGGCGCAGGAAACGGCCAAGCGCATGATTG
CGCGGGCCAAGGGCGCGGAGAAGAACGGCTCGCCGCTGCCGCAATCGCGCATCGTCAACATTGCATCTGTGGCGGGGCTG
AAGGTGCTGTCGCAGATTGGCGTGTATTGCATGAGCAAGGCAGCTGTGGTGCACATGACCAAGGCCATGGCGCTGGAGTG
GGGCCGTTACGGCATCAATACCAACGCGATCTGCCCGGGCTATATCGACACCGAAATCAATCATCACCATTGGGAAACCG
AACCTGGCCAGAAGCTGGTGCAGATGCTGCCGCGCAAGCGCGTCGGCAAGCCGGAAGACCTCGATGGGCTGATTCTGCTG
TTGGCGTCGGATCAGTCCGACTTCATCAACGGTGCCGTCATCAACGCCGACGACGGCATGGTGTAA

Protein sequence :
MGLSINLEGKVALITGASSGLGARFAHTLAAAGAKVVLASRRVERLKELRADIESKGGSAHVVRLDVTDPDSIRSAIAHA
ETEAGTIDILVNNSGVSTTQRMVDVTPDDFDFVFDTNTRGAFFVAQETAKRMIARAKGAEKNGSPLPQSRIVNIASVAGL
KVLSQIGVYCMSKAAVVHMTKAMALEWGRYGINTNAICPGYIDTEINHHHWETEPGQKLVQMLPRKRVGKPEDLDGLILL
LASDQSDFINGAVINADDGMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 6e-28 43