Gene Information

Name : Rpic_1937 (Rpic_1937)
Accession : YP_001899504.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 2043129 - 2044319 bp
Length : 1191 bp
Strand : -
Note : PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rso:RSc1609 putative D-alanyl-D-alanine-endopeptidase (penicillin-binding protein)

DNA sequence :
ATGTCACGGTCTGTTTCCTCATTTTTTCGACGTCTCGGCTTCGTTTCGCTGATGACCGTCGCGCTCGCTGCCGTCTCTGT
CACTACCGTGGCCAACGCTGCCACGACCGACAAAAAACCCGCCGCTAGCAAGAAAGCCAAATCCAAAGGCAAGACCGTCG
CCAATCGCAAGGCCAGCGCCAAAGTCGCGGCTACGAGCGGCGATGAAGTCGCCTCCACCAAAGTCCGCAAGGTCGTCACC
GTCAAAGGCAAGCGTCGCGTGATCATGGTCGAGCGCGGTGCACGTCCGGTGCGTGCGGCGTTCGTGCCGGCGTCCCCGAC
ACTTGGTGAAGCGATGGGACTGCGTTCGACGCCCGATGCGTTGGCGCTGCGTTCCTCCGTTGCGCTGGTGATGGACCAGA
ACAACGGCGAAGTGCTGTTCCAGAAGAATTCGTCGGCCGTGCTGCCGATTGCCTCGATCACCAAGCTGATGACCGCACTG
GTCGTGACCGATGCACATCAGCCGATGGACGAGCTGCTTGAAATTACCGATGAGGATCGCGACTACGAGCGCAACACGGG
CTCGCGCCTGCGCTTCGGCACGATGCTCACGCGCGAAGACCTGCTGCTGCTGGCGCTGATGTCGTCGGAAAACCGTGCAG
CCTCCGCGCTGGGCCGCAACTATCCGGGCGGTCGTCCGGCATTTGTTGCCGCCATGAACCGCAAGGCGCATGAACTCGGC
ATGAACGATACGCACTATGTAGATTCGAACGGCCTGTCTAGCAGCAACGTGTCGAGCGCGCAGGATCTCGCCAAGATCGT
GATAGCTGCCTACAAGGTGCCGCTCATTCGTCAATTCACAACCACCCCCGAACATACGGTCAGCGCCAACGGCCGCACGC
TGCACTACGTCAACACCAACCGTCTGGTGCGCGGCGGCGAATGGGATATCGGCCTGCAGAAGACCGGCTTCATCAACGAA
GCCGGCCGCTGCCTCGTCATGCAGGCCAACGTGCATGGCCGCAATGTCGTGATGGTGTTCCTGGATTCGGCCGGCAACCT
CACGCGCTTTGCGGACGCCACGCGTGTGCGCAATTGGCTGGAGCGCAATCCGCACATCGAGCCGGCCACGCAAGCGGCTG
CGCCGCTGCGGAATGTACCGGTGTCGACGCAGCCCGCCACCGTGCTGGCGTCGGAGCAGCACGGCGCCTGA

Protein sequence :
MSRSVSSFFRRLGFVSLMTVALAAVSVTTVANAATTDKKPAASKKAKSKGKTVANRKASAKVAATSGDEVASTKVRKVVT
VKGKRRVIMVERGARPVRAAFVPASPTLGEAMGLRSTPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTAL
VVTDAHQPMDELLEITDEDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAMNRKAHELG
MNDTHYVDSNGLSSSNVSSAQDLAKIVIAAYKVPLIRQFTTTPEHTVSANGRTLHYVNTNRLVRGGEWDIGLQKTGFINE
AGRCLVMQANVHGRNVVMVFLDSAGNLTRFADATRVRNWLERNPHIEPATQAAAPLRNVPVSTQPATVLASEQHGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 9e-51 48
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 9e-51 48