Gene Information

Name : Rpic_1816 (Rpic_1816)
Accession : YP_001899385.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1909727 - 1910161 bp
Length : 435 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_5946 transcriptional regulator, MerR family

DNA sequence : 
ATGAGCATTCAGATCGGTGAATTGGCCAAGCGCACAGCCTGTCCGATTCAAACCATCCGCTACTACGAGCGCGAGGGTCT
CTTGCCCTCGCCAGATCGCAGTTCGGGCAACTTTCGGCTGTACGGTGAGCGGCACATTGAACGGCTGCAGTTCATCCTCC
ACTGCCGGTCGCTGGATATGCCGCTTGATGACGTCCGTGTCCTGCTGCGCTACCGCGAACAACCGGCCGAGGATTGCGGT
GGGGTCAACACCCTCCTGGACAAGCACATCCATGAGGTCGAGCGGCGCATCGAAGCGCTGGCGGTGTTAAAGCATCACTT
GTGCGCTCTGCGCGAAACCTGTTCGGCCGGGCGAGCCGCTGAGGCCTGCGGAATCCTGCAAGGGTTGTCCGAAGCTGGCT
GCGCGTGCGACGCCGACGCCCCTCATCAGGGCTGA

Protein sequence : 
MSIQIGELAKRTACPIQTIRYYEREGLLPSPDRSSGNFRLYGERHIERLQFILHCRSLDMPLDDVRVLLRYREQPAEDCG
GVNTLLDKHIHEVERRIEALAVLKHHLCALRETCSAGRAAEACGILQGLSEAGCACDADAPHQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-32 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 4e-32 47
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-32 47
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-32 47
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-32 47
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-31 46
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 7e-32 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_1816 YP_001899385.1 MerR family transcriptional regulator BAC0301 Protein 8e-35 61
Rpic_1816 YP_001899385.1 MerR family transcriptional regulator BAC0058 Protein 2e-36 51