|
Name : Rpic_1643 (Rpic_1643) Accession : YP_001899213.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 1726116 - 1728518 bp Length : 2403 bp Strand : + Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Aj DNA sequence : GTGAGTGATTGCGGCTCCAAGGGGTGCGGTTGTGCTGCCACCAACGTGGTGACGCCGGCGGACGGCGATGCGGCGGCTGT TGACCTGAAACGATCCCGCTACCGGATCGACAACATGGACTGCCCGACGGAAGAAACGCTCATTCGCAATAAGCTGGCGG CGCTGCCCGGCGTGGTCAACCTTGAGTTCAACCTGATGCAGCGTTCGCTGGCCGTCCAGCACCGGCTGCCATCCCCGGCG CCGATCGAGCAAGCCTTGGCAGCCGTTGGCATGCGAGCGGTTCGCGCCGATGAAAGCCCCGCCGGGCAGAGCACAGTCCT GACCATTCGTCAGATGGACTGCCCGACCGAAGAAACGCTGATTCGCGGCAAGCTGGCGGGCATGGCGGGCGTGTCAGACA TGCAGTTCAATCTCGTCCAACGCACACTCGCCGTTCAACACGCTGCCGATGCGCTACCGCAAGTGCTGGCTGCCATTCAG TCGCTTGGCTTCGATGCCGAGGTGCGCGACCGCTCTGCCGCAGCACCGCTTCCCGAACAAGATGCCGCGCCCACCAAATG GTGGCCGCTTGCCATTGCCGGCGCGAACGCCGTCTTGGCGGAAGTGGTGTATTGGCTCAACGGTGGCAACCATTGGGTGG TGGTGATCCTGGCGCTGGCCGCGATCCTGACCGGCGGGCTGTCCACCTACAAGAAAGGCTGGATCGCGCTCAAGAACCGC AACCTGAACATGAACGCCCTCATGTCGATCGCAGTCACTGGGGCGATGGTGATCGGCCATTGGCCGGAAGCGGCGATGGT GATGGTCCTCTTCGCCTTGGCGGAGGTCATCGAAGCCCGTTCGCTGGACCGCGCCCGAGATGCGATCCGGGGGCTGATGG ATCTCGCCCCGGAGACAGCCACGGTACAGCGCAGCGACGGCAGTTGGTCCGACGTCGATGCCAAGACCGTGGCCGTTGGC AGCCGTGTGCGGGTCAAGCCGGGCGAGCGCATCGCGCTCGATGGCACGATTCTGCAGGGGCGGTCATCCGTCAATCAGGC GCCGATCACGGGCGAGAGCCTGCCGGTCGAGAAGGCAGCGGGCGACTCCGTGTTCGCCGGCACCATCAACGAATCCGGGT CGTTCGAATATCGCGTCACCGCAGCGGCAAGCGACTCCACACTGGCACGGATCATTCACGCCGTCGAGGCCGCGCAAGGC AGTCGAGCGCCCACGCAGCGCTTCGTTGACCAGTTCGCCCGGCTGTACACGCCCATTGTGTTCGCGGTTGCGCTTGCGGT GGCCATCGTCCCTCCGCTGGTCTTCGGTGCGACTTGGCTGGACTGGATCTACAAGGCCCTAGTTCTTCTCGTGATTGCTT GCCCCTGCGCGCTCGTGATCTCGACGCCGGTGAGCATTGTGAGCGGCCTGGCGGCCGCCGCGAAGCGCGGCATCCTCATC AAGGGCGGCGTCTATCTGGAAGAGGGACGCAAGCTGAAATGGTTGGCGCTCGACAAGACCGGCACGATCACGCACGGCAA GCCAGCGCAGACGGACGTCGTGGCCTGGAACGGTGCGGACGCGTCCGCCGCCCAGATCCTGGCAGCTAGCCTGGCTGCCC GCTCCGACCATCCCGTCTCCCTGGCCGTGGCCCGCGCGGCGCAGGACCAAGGCCTAGCCCTGCGCGACGTCACCGATTTT GCGGCCTTGCCCGGACGCGGCGTCCGGGGCCATGTCAACGGTGCGCTCTATCACCTGGGCAATCATCGTCTGGTCGAGGA ACTGGGCGTGTGTTCGCCGGCATTGGAAGCACAGCTTGCCGTGCTGGAAACCCAGGGCAAAACGGTCGTGATGCTGATCG GCCAGGACGGCGTACGCGCGTTGTTCGGTGTGGCGGACACCATCAAGGACAGCAGTCGCCAAGCGATCAAGGAATTGCAC GCACTGGGCATCAAGACTTTGATGCTGAGCGGCGACAATCCGCACACCGCAGAGGCGATTGCGCAGCAGGTCGGTATCGA CGAGGCTCGCGGTAATCTGCTGCCGGAAGACAAGCAGCGCGAAATCGAGCGCCGATCCGCACAAGGAACCATCGGCATGG TCGGCGATGGCATCAACGATGCGCCGGCGCTGGCACGGGCCGATATTGGATTCGCAATGGGCGCGGCCGGGACGGACACG GCGATCGAAACGGCCGACGTTGCGCTGATGGACGACGATCTGCGCAAGCTCCCGGCGTTTGTACGACTATCCCGGTCCAC GGCCGGGGTGCTGAAGCAGAACATTGCGCTGGCGCTCGGCATCAAGGTCGTGTTCCTGGCACTGACCTTTACAGGCCAGG CCACCATGTGGATGGCGGTGTTTGCCGACATGGGCGCCAGCCTGCTGGTGGTCGGCAACGGGCTGAGGTTGCTGCGCAAA TGA Protein sequence : MSDCGSKGCGCAATNVVTPADGDAAAVDLKRSRYRIDNMDCPTEETLIRNKLAALPGVVNLEFNLMQRSLAVQHRLPSPA PIEQALAAVGMRAVRADESPAGQSTVLTIRQMDCPTEETLIRGKLAGMAGVSDMQFNLVQRTLAVQHAADALPQVLAAIQ SLGFDAEVRDRSAAAPLPEQDAAPTKWWPLAIAGANAVLAEVVYWLNGGNHWVVVILALAAILTGGLSTYKKGWIALKNR NLNMNALMSIAVTGAMVIGHWPEAAMVMVLFALAEVIEARSLDRARDAIRGLMDLAPETATVQRSDGSWSDVDAKTVAVG SRVRVKPGERIALDGTILQGRSSVNQAPITGESLPVEKAAGDSVFAGTINESGSFEYRVTAAASDSTLARIIHAVEAAQG SRAPTQRFVDQFARLYTPIVFAVALAVAIVPPLVFGATWLDWIYKALVLLVIACPCALVISTPVSIVSGLAAAAKRGILI KGGVYLEEGRKLKWLALDKTGTITHGKPAQTDVVAWNGADASAAQILAASLAARSDHPVSLAVARAAQDQGLALRDVTDF AALPGRGVRGHVNGALYHLGNHRLVEELGVCSPALEAQLAVLETQGKTVVMLIGQDGVRALFGVADTIKDSSRQAIKELH ALGIKTLMLSGDNPHTAEAIAQQVGIDEARGNLLPEDKQREIERRSAQGTIGMVGDGINDAPALARADIGFAMGAAGTDT AIETADVALMDDDLRKLPAFVRLSRSTAGVLKQNIALALGIKVVFLALTFTGQATMWMAVFADMGASLLVVGNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 72 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 2e-118 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic_1643 | YP_001899213.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 79 |
| Rpic_1643 | YP_001899213.1 | heavy metal translocating P-type ATPase | BAC0455 | Protein | 3e-93 | 42 |
