Gene Information

Name : Rpic_0145 (Rpic_0145)
Accession : YP_001897740.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 163047 - 163679 bp
Length : 633 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc0292 response regulator transcription regulator protein

DNA sequence :
ATGATTCGCGTCCTGATTGCGGACGACCACGAGATCGTTCGCGCCGGCCTTCGACAGTTTCTGTCCGAAGAGCGGGACAT
CGAAGTCGCGGGGGAAGCGGCCAGCGGGGAAGAGGTGATGGAGCAACTCCGCACCGGGGCCTTTGACGTCGTGGTGCTCG
ACATTTCCATGCCCGATCGCAACGGCATCGACACCCTCAAGCTGGCTCGCCAGCGCCATCCGGATCTGCCGGTGCTGATC
CTGTCGACCTTCCCGGAAGACCAGTACGCCATCAACCTGATCCGCGCAGGGGCATCGGGCTATCTGACAAAAGAAAGCGC
GCCGGACGAGCTGGTCAAGGCCATCCGTACCGTGTCGCAAGGCCGTCGCTATGTCAGCCCGACCGTGGCCGAGCTGCTCA
TTGGCGGCCTGGAAAAGCCGACCGACCAGCCGCTGCACCAGACGCTGTCCAAGCGTGAGTTTCAGATCTTCTGCAAGCTG
GCGCGCGGGCAATCGGTATCGATCATCGCGGAAGAGCTGTTCCTGAGCGTCAAGACGGTCAGCACTTACCGCACGCGGAT
TCTGGAAAAGATGGGCATGAAATCCAATGCCGATCTGACGTATTACGCCATCAAGAACGGCCTGGTTGAGTAG

Protein sequence :
MIRVLIADDHEIVRAGLRQFLSEERDIEVAGEAASGEEVMEQLRTGAFDVVVLDISMPDRNGIDTLKLARQRHPDLPVLI
LSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQGRRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKL
ARGQSVSIIAEELFLSVKTVSTYRTRILEKMGMKSNADLTYYAIKNGLVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 8e-29 43
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 8e-29 43
hrpY AAD24683.1 response regulator HrpY Virulence Hrp PAI Protein 2e-29 41