Gene Information

Name : Rpic_1217 (Rpic_1217)
Accession : YP_001898793.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1306611 - 1307450 bp
Length : 840 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc1341 putative aliphatic sulfonates ATP-binding ABC transporter protein

DNA sequence :
ATGCAAAGCAATGCCACTGAACACGCCGCGCTGGCCGGCACCGCCCTGCACATCGAACACGTCGTCAAACGCTACGGCGA
TCGTGAAGTGCTGCATGGCATCGATCTGGACATCACGCCGGGCGAGTTTGTCGTCATCGTTGGCCGCAGCGGCTGCGGCA
AGAGCACGCTACTGCGATTGATTGCCGGGCTGGAAGGCATTGACGACGGCCACCTGCGTCGCGACGGTGAAGCAGAAGAC
GGCCTGCATGACGATGCCCGCGTGATGTTCCAGGACGCCCGTCTGTTGCCGTGGAAGAAGGTGCTCGACAACGTCGCGCT
GGGCTTGCCGAAAACGCAGCGTGCGCAAGCCGCTGAAGTGCTTGCGCAAGTCGGACTGGCCGAGCGGGCAGGGGAATGGC
CGGCACGCCTGTCAGGCGGACAGCGCCAGCGCGTGGCATTGGCGCGTGCGCTGGTGCATCGACCGCGCTTGCTGCTGCTG
GATGAGCCGCTGGGCGCGCTTGATGCGCTCACCCGCATCGACATGCAGAACCTTATCGAAGGCCTGTGGCAGCGCCTGGG
CTTTACGGCCGTGCTCGTCACGCACGACGTGGCCGAGGCGGTGGCGCTCGCCGACCGTGTGGTGCTGATCGAAGACGGCC
GCATCACACTCGATGAACGCATTGATCTGCCGCGTCCGCGCCATCGTGGTTCGCCCGCGTTTGCGCGGCTGGAGGAATCC
ATCCTCAACCGTGTGATGCAGCGCAAGATCGATCCGAATGAAGTGACCGATGTGCGTTCGCACACGGCGTGGGCATCACC
CTTTGACGTGTCCGCCACATCCGTGCGCTGGGCCGTGTAA

Protein sequence :
MQSNATEHAALAGTALHIEHVVKRYGDREVLHGIDLDITPGEFVVIVGRSGCGKSTLLRLIAGLEGIDDGHLRRDGEAED
GLHDDARVMFQDARLLPWKKVLDNVALGLPKTQRAQAAEVLAQVGLAERAGEWPARLSGGQRQRVALARALVHRPRLLLL
DEPLGALDALTRIDMQNLIEGLWQRLGFTAVLVTHDVAEAVALADRVVLIEDGRITLDERIDLPRPRHRGSPAFARLEES
ILNRVMQRKIDPNEVTDVRSHTAWASPFDVSATSVRWAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-38 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-17 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-17 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-17 41