Gene Information

Name : Rpic_1151 (Rpic_1151)
Accession : YP_001898729.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : ABC-2 type transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1233245 - 1234036 bp
Length : 792 bp
Strand : +
Note : PFAM: ABC-2 type transporter; KEGG: bte:BTH_I1336 CtrC protein

DNA sequence : 
ATGCGACATGACACGCCATTGCTGAGATCATTCCAGATCCAGTTGCGCGTGGTGGGGGCTTTGCTGATGCGCGAAATCCT
TACCCGCTACGGGCGGCACAACATCGGCTTCCTGTGGGTGTTTTTCGAGCCGATGATGTTCACCTTGGGGGTGACAGCGC
TATGGACGTTGAGCAAAGCCACCCATGGTTCCAGTTTGCCTATCACCGCGTTTGCTGTAACTGGATATTCCTCGGTACTG
GTCTGGCGAAACAGCGCAAGCCGTTGCGCGTTGGCGATTGAGCCTAATCAGAGCTTGCTGTATCACCGTAATGTCCGGGT
GATCGATCTGTTTTTGTCGCGCGTCATTCTGGAGATTGCCGGGGCGACCATTTCCTTTTTGTTTTTGACAACGCTGTTTG
TTACCTTGGGCATGATGGAGCCGCCGGCTGATATCACGCAGATCATTGGCGGCTGGATCTATCTGTCCGTCTTTGGCATT
GGGCTGGGTTTTATCGTCGGTGCGCTAAGCGAGCGGAGTGAAGCTGCTGAACGGATCTGGCATACCGTCGCCTATCTGCT
ATTTCCGCTTTCGGGGGCGCTGTTCATGGTCGACTGGATGCCAAGGGCCGTCCAAAAGTACATTTTGCTGCTTCCGATGG
TTCATGGCGTCGAGATGGTACGCGGGGGCTATTTCGGTGCGCTAGTCAAGCCCCATTACGACATCGGTTACATGGTCGTT
GCCGATCTGGTGATGCTGTTGGTCGGTCTGTTTTTCGTGATGGACGCCAGCAAGCGAGTGGAGCCGGAATGA

Protein sequence : 
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKATHGSSLPITAFAVTGYSSVL
VWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIAGATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGI
GLGFIVGALSERSEAAERIWHTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
ADLVMLLVGLFFVMDASKRVEPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 2e-48 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_1151 YP_001898729.1 ABC-2 type transporter VFG2564 Protein 4e-70 60
Rpic_1151 YP_001898729.1 ABC-2 type transporter VFG0257 Protein 8e-49 48
Rpic_1151 YP_001898729.1 ABC-2 type transporter VFG0697 Protein 5e-46 43
Rpic_1151 YP_001898729.1 ABC-2 type transporter VFG0685 Protein 5e-46 43