Gene Information

Name : Rpic_1150 (Rpic_1150)
Accession : YP_001898728.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Virulence
Product : WcbD protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3524
EC number : -
Position : 1232060 - 1233226 bp
Length : 1167 bp
Strand : +
Note : KEGG: bte:BTH_I1337 WcbD

DNA sequence : 
TTGGAAAATACGTTGGATACGGTACTGAGAGAAGACACGGCCGCTGAGGCGACCAGAAGCAGAAGTGGGCTTTGGCAGCG
TTTGAAACGCGTTAACCGGCTCTTTCTCGGCACTGTTGTTGTGCCAACCGCGCTCGCGACGCTCTACTTTGGCGTTGTTG
CGTCCGATATCTACGTTTCTGAGTCGCGCTTTGTGGTGCGCAGCCCGCAGCGGCAGAGCCAGAGCGGCAGCCTGAGTGCG
CTCTTGCAGGGCACCGGCTTCTCGCGGGCGCAGGATGACACCTATCCGGTGATCGATTACATCGAATCGCGCGATGCCCT
GGGCGAGCTGAACCGAAACAACTATATCCTCGACGCCTACGGCAACCACGGCGACATCCTGAGCCGGTTCCTGCGGCAGT
TCGACGATAGTTTTGAAGCGCTCTGGAAGTACTATAACAAGCGCGTGGTCACGGTGGAGTTCGACTCCACCTCCGCGATC
ACCACGCTGCAGGTGCGCTCGTTCTCCTCGCAGGATGCGATCAAGATCAATGAGTCTCTGCTGGAACTGAGTGAACACTT
GATCAACCGCATGAACGAGCGCGCCGCGAAAGACATGGTGCAGTTCGCGCGCGCCGAGGTCGATGCGGCTGCGGCCAAAG
CCAAGGATGCAGCGGCGGCGCTGGCGGCCTATCGTAAATCGAACACCGTGTTCGACCCCGACAGGCAGTCGGCCTTGCAA
TTGCAGCAGGTAACTACGCTGCAGGCGCAACTGTTCAGTGCGCAGACGCAGCTGTCCCAGCTACAAGCCATTGCGCCACA
GAATCCGCAGATTCCGGTGCTGAAAACCAATATTGCCGCAGTGGAAAAACAAATCCAGGAGGCAACGGGCGGTGTAACGG
GGGGCAAGGGTTCGCTGTCGGATAAGGCCGCCAACTACACCCGCCTTCAACTCGACTCGCAGTTTGCCGACAAACAGTTG
GCATCGGCGATGGCGGCGCTGGAGAATGCCCGCGCTGAAGCGCAGCGCAAGCAACTGTACCTGGAACGTCTGGTGCAGCC
GAATCAGCCGGATGTGGCGGTCGAACCGAAGCGGTTGAAGCGGATTTTCGAAATTTTCGCCCTGGGCATGCTGGTGTGGG
GGGTTCTCAGCTTAGTGCTTGCCGGCGTTCGCGAGCATCACGATTAA

Protein sequence : 
MENTLDTVLREDTAAEATRSRSGLWQRLKRVNRLFLGTVVVPTALATLYFGVVASDIYVSESRFVVRSPQRQSQSGSLSA
LLQGTGFSRAQDDTYPVIDYIESRDALGELNRNNYILDAYGNHGDILSRFLRQFDDSFEALWKYYNKRVVTVEFDSTSAI
TTLQVRSFSSQDAIKINESLLELSEHLINRMNERAAKDMVQFARAEVDAAAAKAKDAAAALAAYRKSNTVFDPDRQSALQ
LQQVTTLQAQLFSAQTQLSQLQAIAPQNPQIPVLKTNIAAVEKQIQEATGGVTGGKGSLSDKAANYTRLQLDSQFADKQL
ASAMAALENARAEAQRKQLYLERLVQPNQPDVAVEPKRLKRIFEIFALGMLVWGVLSLVLAGVREHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 6e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_1150 YP_001898728.1 WcbD protein VFG2565 Protein 2e-60 49
Rpic_1150 YP_001898728.1 WcbD protein VFG0698 Protein 1e-50 46
Rpic_1150 YP_001898728.1 WcbD protein VFG0686 Protein 1e-50 46
Rpic_1150 YP_001898728.1 WcbD protein VFG0256 Protein 3e-47 46