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Name : Rpic_0993 (Rpic_0993) Accession : YP_001898573.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1048762 - 1051410 bp Length : 2649 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCTGAACACTCCGCTCCGGTTCTGGAGATCGACCCGAAATACGGCCCTTTCGACAAGCACACCCCGATGATGCAGCA GTATTTACGGCTGAAATCGGGGCATCCGAACACGCTTGTCTTCTATCGCATGGGCGACTTCTACGAGCTCTTCTTTGAAG ATGCCGAAAAAGCCTCGCGCCTGCTCGATATCACGCTCACCGCACGCGGCAGCTCCAACGGGCATCCGATCCGCATGGCG GGCATCCCGTTCCACGCTGCCGAGCAATACCTCGCCAAGCTGGTCAAGCTGGGCGAATCCGTGGCCATCTGCGAACAGAT CGGGGACCCGGCCACAGCCAAGGGGCCGGTCGAGCGCAAGGTCGTACGCGTCGTCACACCCGGCACGCTGACGGACGCCG CCCTGCTTTCCGACAAGATCAACAACCATCTGCTGGCCATCGCGCATCTGCCGGCCAAGCGCGGCGCCGCACCGCTGATC GGTCTGGCCTGGCTCAACCTCGTCGGCGGCGAATTGCGCGTGATGGAGTGCAGCCCCGACCAGCTCGACCGCGAACTCGA ACGCATCCGCCCCGCCGAAGTGCTGGCCGACGATGCAACGCTCAACACCATCCAGGTGGATGTTGCCCGCACGCGCCTGC CCGATTGGCACTTCGACGTGGAAGCCGGCACCCGCCGCCTGCGCGAGCAACTCGGCGTCGCGAGCCTCGTCGCCTTTGGT GCGGAAACGTTGACGGCCGCACTGGCGGCTGCCGGCGCGCTGCTCAATTACGCAGCCGCCACGCAAGGCCAATCGCTGCG TCACGTGATCGGCCTGACCGTCGAGCACGAAAGCGAATTCATCGGCCTGGACACCGCCACGCGCCGCAACCTGGAACTGA CCGAGACGCTGCGTGGGCAGGAATCGCCGACGCTGTTCTCGCTGCTCGACACGTGCGCCACGAGCATGGGCAGCCGCCTG CTGCGCCATTGGCTGCATCATCCACTGCGGGATCGTGCCATCCCCCAAGCGCGGCAGCAGGCGATCGAGGTGCTGCTCGG CGGCGATTGGCAAACATTGCGCTCGACGCTGCGCACGCTGTCGGATGTGGAGCGCATTACCGGGCGACTGGCGCTGCTGT CGGCGCGCCCGCGCGATCTGTCTTCGCTGCGCGACACGCTCGCGCGCCTGCCCGAGATTCGCGAAGAACTGCCGCAGAGC GACGCGGCTCCGCTGCTCATCGAGCTGTACGCCGCGCTCACCCTGCCCGAAGACGCCCACGCCCTGCTGCAGCGCGCCGT GATGGCCGAGCCGGCAGCGATGGTGCGAGACGGCGGCGTCATCGCCCGCGGCTACGATGCCGACCTCGACGAGCTGCGCG ACATCTCGGAAAACTGCGGCCAGTTCCTCGTCGATCTGGAAGCCCGCGAGCGCGAGCGCACCGGTATCGCCAATCTGCGC GTCGAATACAACCGCGTGCACGGCTTCTACATCGAAGTCACCAACGGCCAGGCCGCCAAGGTGCCGGACGATTACCGCCG CCGCCAGACGCTGAAGAACGCCGAGCGTTACATCACGCCCGAGTTGAAAGCGTTCGAAGACAAGGCGTTGTCGGCGCAGG ACCGTGCCCTGTCGCGCGAAAAGCTCCTCTACGAAGAGCTGCTCCAGAAACTGTTGCCGCACCTGGCCGAATTCAAACGT ATCGCCGCCGCGCTGGCACAGGCCGATGTGCTCGCGACGCTGGCCGAGCGTGCGCATGCGCTGTCGTGGTCGCGCCCCAC GCTGACGGACGCACCCGGTATTGAGCTGACGCGCGCACGCCATCCGGTGGTCGAACAACAAGTCGAACAGTTCGTCGCCA ACGACTGCATGCTGCAGGAGGCGCGCAAGCTGCTGCTGATCACGGGCCCAAACATGGGCGGTAAATCGACCTTCATGCGG CAAACCGCGCTGGTCGTGCTGCTCGCTTACGTGGGCGCATTTGTGCCGGCGGAGGCCGCAGTCATCGGCCCAATCGACCG TATCTTCACGCGTATCGGCGCGGCCGACGATCTGGCGGGTGGCCGATCCACCTTCATGGTTGAGATGACGGAAGCGGCTG CCATCCTGCACCGCGCCACACCCAACAGCCTGGTGCTGATGGACGAGATTGGCCGCGGAACGAGCACGTTCGACGGCCTG GCGCTTGCCTGGGCGATTGCGCGTCACTTGCTGTCGCACAATCGCAGCCACACGCTGTTCGCCACGCACTATTTCGAGCT GACACAACTGCCGCAGGAGTTCGCACAGGCCGCCAACGTGCATCTCTCCGCCGTCGAACATGGTGACGGCATCGTCTTCC TGCATGCCGTGCAGGAAGGTCCGGCCAGCCAGAGCTACGGCTTGCAGGTCGCACAACTGGCGGGCGTGCCGCAGCCGGTC ATTCGCGCCGCGCGCAAACGGCTGGCCTGGCTGGAGCAGCATTCCGCCGACACAGGCGCCACGCCCCAGCTCGACCTGTT TGCACTCGCCGCCGATATGCCCATCGTCGACGAAGGCGATGCCGACGCCGAAACACCCGACAGCGCGCTTGCGGATGCGC TTGCCGGGATCGATCCCGACGATATGACGCCGCGGGAAGCGCTTGATGCGTTGTACCGCCTCAAGGCATTGGCGAGCCCG GCCGCCTGA Protein sequence : MAEHSAPVLEIDPKYGPFDKHTPMMQQYLRLKSGHPNTLVFYRMGDFYELFFEDAEKASRLLDITLTARGSSNGHPIRMA GIPFHAAEQYLAKLVKLGESVAICEQIGDPATAKGPVERKVVRVVTPGTLTDAALLSDKINNHLLAIAHLPAKRGAAPLI GLAWLNLVGGELRVMECSPDQLDRELERIRPAEVLADDATLNTIQVDVARTRLPDWHFDVEAGTRRLREQLGVASLVAFG AETLTAALAAAGALLNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRL LRHWLHHPLRDRAIPQARQQAIEVLLGGDWQTLRSTLRTLSDVERITGRLALLSARPRDLSSLRDTLARLPEIREELPQS DAAPLLIELYAALTLPEDAHALLQRAVMAEPAAMVRDGGVIARGYDADLDELRDISENCGQFLVDLEARERERTGIANLR VEYNRVHGFYIEVTNGQAAKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALSREKLLYEELLQKLLPHLAEFKR IAAALAQADVLATLAERAHALSWSRPTLTDAPGIELTRARHPVVEQQVEQFVANDCMLQEARKLLLITGPNMGGKSTFMR QTALVVLLAYVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLMDEIGRGTSTFDGL ALAWAIARHLLSHNRSHTLFATHYFELTQLPQEFAQAANVHLSAVEHGDGIVFLHAVQEGPASQSYGLQVAQLAGVPQPV IRAARKRLAWLEQHSADTGATPQLDLFALAADMPIVDEGDADAETPDSALADALAGIDPDDMTPREALDALYRLKALASP AA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-166 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic_0993 | YP_001898573.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 53 |
