Gene Information

Name : Bphyt_0946 (Bphyt_0946)
Accession : YP_001894589.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 1064498 - 1066387 bp
Length : 1890 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bxe:Bxe_A4431 hypothetical protein

DNA sequence :
ATGGATCCGCGACTGCTCGATTACTACAACCAGGAACTGATGTATGTACGCGAACTGGCTGGCGAGTTCGCGCAACTGCA
TCCGAAGATCGCGCGGCGGCTCGGCATGCAGGCCGGCGAGATGACCGATCCGTACGTCGAACGGCTGATCGAGTCGTTCA
GCTTCATGGCGGCGCGTATGCAGCTCAAGCTCGACGCGGAATTCCCGCGCTTCACGGGACGTCTGCTAGAGGTGATCTAC
CCGAACTATGTGGCACCGACGCCGTCCATGGCGGTCGCGCGCTTCTATCCGAGCCCGAGCGAAGGCAACCTCGTCGAAGG
CTTCCCTGTGCGGCGCGGCAGCATGCTCACGGGCAAGAAGTCGCCGGGGGAGAACACTTTGTGCGAATTCCGCACGGGCC
AGGACGTCGCGCTCTATCCGCTCGAGATTACCCATGCACAACTGACGGGGATTCCGCCGGACATTCCCATGCTCGACCGC
TATGTGCCGCCCCACACGCAAGTGCGTGGCGCATTGCGGCTGCGATTGCGTTCCACGGGCGATGCCAAAATCGCCGAGCT
GCGCGGACTCGACCGACTGCCGGTCTATCTCGCCGGAGATGAGCAGGTTGCGTCGCATCTGTTCGAACTGCTTCACGCGG
CAGGCGTTGCGTCGATCACGGGCGAGCCTGGGCGTTTCGGCGACGCGGCGCGCCCCTTCTGTGCGGTCACGCATGGCGCG
GTCGCACACGAGGGGCTTGGCGTCGATCAGGGTTTGCTGCCGCTCACCTGGTCGAAATTCCATGGGCACAATCTTCTACA
CGAATATTTCGCATGTCCGAGCCGCTTTTATTTTTTCACGCTGACCGGACTGCGCGAAGGGCTCAGCAAGGCGAAAGGCC
ATGAAGTCGAGATCGTGGTGCTGCTCGATCAGTCACCGGACCGGCTGATCGGCCTTGTCGACGCCTCGCGTTTCGCGCTG
TTTTGCACACCCGTGATCAATCTGTTTCCGCGCAAAGCGCAGCGCATCGAATTGAATCAGGCCAGCACGGAATTCCATCT
GGTTCCGAAGCGCAGCGCGCCGCTCGACTACGAAGTCTATTCGGTCGAAGCACTCACGGCGCAGGTCGGCAAGAACTCGA
CGGAATTCGCCTTCCGGCCGTTGTATCAAACGCTGAACAACGACGAAGGCAACCACGGGCGCTATTTTTCGCTTCGCCGC
GAACGCCGGTTGTTATCTGACTCGGCCCGCCGCTACGGTACGCGCACGCCGTACATTGGAACTGAAGTGTTCGTGTCGCT
GGTCGACCAGCAGGAAGCGCCGTATCACGAGGGAATGCGCTATCTGTCGATCGACGCCTGGCTGACCAATCGCGACTTGC
CGAATCTGTTGCCGCGCAACGGCGTGGACGATCTGGACGCCGTTGACTCGGTGCCTGCGATCAGCGTCGGCTTGATTCGT
GCGCCAAGCGCGCCTCGCGCGCCGTTTGCCGAGCGCGAAACAGCTTGGCGGCTTATCCGGCAACTGAACTTCAACTATTT
GCCGCTGGAAGATATGGATCACCGCCCTGGCGGCCAGGGTGTGCGCGACATGCTGCGCCTGTTCCTGACCGGCGACGACG
TGGGACCGCGGCGTCAGGTGGAAAGCCTCGTCGGCGTGAAGACGCGGCCGGTCGCGAGGAAGCTGCCCGGTGGCGGCCCG
CTGGTGTTCGGTCGCGGCATCGAATGTCAGTTGACGGTCGATGAAACCGGCTTTTCCGGTTTGAGCCCCTACCTGTTCGG
GGTGATTCTCGAGCACTATCTGGCACGGCACGTATCTATCAATTCGTTCACGCAGACCGAGCTTCATTCAATGCAGCGCG
GCCAGTTGATGCGCTGGCCCGTGCGCATGGGCACACGTGGAGTGGCTTGA

Protein sequence :
MDPRLLDYYNQELMYVRELAGEFAQLHPKIARRLGMQAGEMTDPYVERLIESFSFMAARMQLKLDAEFPRFTGRLLEVIY
PNYVAPTPSMAVARFYPSPSEGNLVEGFPVRRGSMLTGKKSPGENTLCEFRTGQDVALYPLEITHAQLTGIPPDIPMLDR
YVPPHTQVRGALRLRLRSTGDAKIAELRGLDRLPVYLAGDEQVASHLFELLHAAGVASITGEPGRFGDAARPFCAVTHGA
VAHEGLGVDQGLLPLTWSKFHGHNLLHEYFACPSRFYFFTLTGLREGLSKAKGHEVEIVVLLDQSPDRLIGLVDASRFAL
FCTPVINLFPRKAQRIELNQASTEFHLVPKRSAPLDYEVYSVEALTAQVGKNSTEFAFRPLYQTLNNDEGNHGRYFSLRR
ERRLLSDSARRYGTRTPYIGTEVFVSLVDQQEAPYHEGMRYLSIDAWLTNRDLPNLLPRNGVDDLDAVDSVPAISVGLIR
APSAPRAPFAERETAWRLIRQLNFNYLPLEDMDHRPGGQGVRDMLRLFLTGDDVGPRRQVESLVGVKTRPVARKLPGGGP
LVFGRGIECQLTVDETGFSGLSPYLFGVILEHYLARHVSINSFTQTELHSMQRGQLMRWPVRMGTRGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_0946 YP_001894589.1 type VI secretion protein VFG2074 Protein 4e-118 43