Gene Information

Name : fliP (Bphyt_3780)
Accession : YP_001897392.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 4231336 - 4232169 bp
Length : 834 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGCAGTTCAGTCTCTCTTCGGCGCGTCACGCGCATTCCGCTCGCATGTCCAGCACCCTTTCGAAAGTGATTTCGGCCGT
GCGCCGCGTGGCGCCTGTCGGCCCGATCGCACTCGCGGCGTTGATGCTCGCACTGCCGACTCTGTCGTTCGCGCAGGCCG
CGGGCTTGCCGGCCTTCAACACGAGCCCCGGCCCGAACGGCGGCACGACCTACTCGCTGAGCGTGCAGACGATGCTGCTG
CTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACCAGCTTCACGCGCATCATCATCGTGCTCTCGCTGCT
GCGCCAGGCGCTCGGCACGAGCACGACGCCGCCTAATCAGGTGCTCGTCGGACTCGCGCTGTTCCTCACGCTGTTCGTGA
TGTCGCCGGTGCTCGACAAGGCTTATACCGACGGCTACAAGCCATTCTCCGACGGCACGATCCCGATGGAGACCGCCGTC
AACCGCGGCCTCGCGCCGTTCAAGACGTTCATGCTGCGTCAGACTCGCGAAAGCGATCTCGCATTGTTCGCGCGCATTTC
GCACGCCGCGCCGATGCAAGGTCCGGAAGACGTGCCGCTGTCGCTGCTGGTGCCCTCGTTCGTGACGAGCGAGCTGAAAA
CCGGCTTCCAGATCGGCTTCACGATTTTCATTCCGTTCCTCATCATCGACATGGTGGTGGCGAGCGTGCTGATGTCGATG
GGTATGATGATGGTGTCGCCCGCGACTATTTCGCTGCCGTTCAAGTTGATGCTGTTCGTGCTTGTGGACGGCTGGCAGCT
GCTGCTCGGCTCGCTCGCACAGAGCTTCGTTTAA

Protein sequence : 
MQFSLSSARHAHSARMSSTLSKVISAVRRVAPVGPIALAALMLALPTLSFAQAAGLPAFNTSPGPNGGTTYSLSVQTMLL
LTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTSTTPPNQVLVGLALFLTLFVMSPVLDKAYTDGYKPFSDGTIPMETAV
NRGLAPFKTFMLRQTRESDLALFARISHAAPMQGPEDVPLSLLVPSFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSM
GMMMVSPATISLPFKLMLFVLVDGWQLLLGSLAQSFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 9e-26 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-23 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 2e-24 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 2e-24 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 4e-25 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 4e-25 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 3e-25 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 3e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001897392.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-85 90
fliP YP_001897392.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-67 71
fliP YP_001897392.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-57 60
fliP YP_001897392.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-52 53
fliP YP_001897392.1 flagellar biosynthesis protein FliP VFG0519 Protein 2e-25 41