Gene Information

Name : Bphyt_3296 (Bphyt_3296)
Accession : YP_001896911.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3713118 - 3713900 bp
Length : 783 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0670 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGAATTCTGATTGCCGAAGACGACAGCATACTCGCGGACGGTCTGGTTCGATCACTCCGCCAATCGGCCTATGCCGT
CGATCACGTGAAGAGCGGCGTCGAGGCCGATACCGCGCTGTCCATGCAATCTTTCGACCTGCTGATTCTCGATCTGGGCC
TGCCGCGCATGTCCGGCCTCGAGGTGCTGCGGCGCCTGCGCGCGCGCAATTCCACCCTGCCGGTGCTGATCCTGACCGCC
GCGGACAGCGTCGATGAACGCGTCAAGGGTCTCGACCTCGGCGCCGACGACTACATGGCCAAACCCTTCGCGCTGAACGA
ACTCGAAGCACGCGTGCGCGCCCTGACGCGGCGCGGCGCGGGCGGCGGCCCGACGGTCGTGCGGCACGGCTCGCTGTCGT
TCGACCAGGTCGGCCGGATCGCCTATGTCAACGAGCAGGTGATCGACCTGTCGGCGCGCGAACTGGGTTTGCTCGAAGTA
CTGTTGCAACGGATCGGCCGGCTGGTATCGAAGGAACAACTCGTCGATCACCTGTGCGAATGGGGCGAGGAAGTCAGCAA
TAACGCGATCGAGGTCTACGTGCATCGCCTGCGCAAGAAAATCGAGCCGAGCGGCGTGCGTATCATCACCGTGCGCGGTC
TGGGTTATTGCCTTGAGAAAGCGGCGTCGCCGGCGAGCGTAAGCGCGAGCACGAACGCCATGACCACGCCCCCGCCCGCC
GAGCCCGAACCGCCCGGCTCGCCGCCGTCCGGCGCGATGCCGGCAAGCCATCACTACAAATAG

Protein sequence : 
MRILIAEDDSILADGLVRSLRQSAYAVDHVKSGVEADTALSMQSFDLLILDLGLPRMSGLEVLRRLRARNSTLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAGGGPTVVRHGSLSFDQVGRIAYVNEQVIDLSARELGLLEV
LLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEPSGVRIITVRGLGYCLEKAASPASVSASTNAMTTPPPA
EPEPPGSPPSGAMPASHHYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-36 45
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator BAC0487 Protein 1e-37 44
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator BAC0638 Protein 6e-30 43
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-31 43
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-30 41
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 3e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator VFG1390 Protein 9e-36 44
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator VFG0473 Protein 7e-41 44
Bphyt_3296 YP_001896911.1 winged helix family two component transcriptional regulator VFG0475 Protein 3e-29 41