Gene Information

Name : Bphyt_3099 (Bphyt_3099)
Accession : YP_001896715.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 3491753 - 3492904 bp
Length : 1152 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bxe:Bxe_A0895 riboflavin biosynthesis protein RibD

DNA sequence :
ATGTTTTCGCAAACCGATTTCGTCCATATGGAACGCGCGCTCGCGTTGGCCAAGCGCGGCATGTACACCACCGACCCGAA
TCCGCGGGTCGGCTGCGTGCTCGTCAAGAACGGCGAGGTGATCGGCGAAGGCTTTACGCAACCGGCCGGCCAGGACCATG
CCGAGATCCGCGCGCTGAAAGACGCCCGCTCGCGCGGTCACGATCTGCGCGGGGCCACGGCCTACGTGACGCTGGAGCCG
TGCAGCCATTTCGGGCGCACGCCGCCGTGCGCGAATGCTTTGATCGAAGCCCAGGTCGCGCGTGTTGTCGCGGCAATGGA
AGATCCCAATCCGCAGGTATCCGGGCGCGGTCTCGCCATGTTGCGCGACGCCGGCATCGAAGTACGCTGTGGACTGTTGG
CCCACGAAGCGCACGAACTCAATATCGGCTTCGTCTCGCGCATGACACGCGGCCGCCCGTGGGTACGCATGAAGGTGGCG
GCCTCGCTGGATGGACGCACCGGCTTGCCTTCGGGCGACAGCCAATGGATCACTGGCGAAGCGGCGCGCGCCGACGGCCA
CGCCTGGCGCGCCCGCGCGTCGGCGATTTTGACGGGCATCGGCACGGTCAGGGAGGACAATCCGCGCATGACGGTGCGGG
CTGTCGATACGCCGCGCCAGCCGCAACGCGTACTGATAGACAGCCAGCTCGACGTGCCGCCGGACGCACAGATTCTGGCC
GGCGCATCCACGCTGATCTTCTGCGGCAATCTGGATGGGCGACATACCGATCGCGCCGCCGCGTTGCGCGATCGCGGCGC
GGAGATCGTCCAATTGGCGAACCCGGCCGGCAAGGTCGATCTGCCTGCGGTGCTCAAAGTGCTCGGCCAGCGCAACGTCA
ACGAACTGCATGTCGAGGCGGGCTACAAGCTGAACGGCTCGCTGCTGCGCGAAGGCTGCGTCGATGAATTGCTCGTGTAT
CTCGCGCCGAGCCTGCTCGGCATGGATTCGATGAGTATGTTCAATCTGAGCGCGCCCGAAACGCTCGAGGGCCGCGTCAA
ACTGAACTTCCATGCGGTCGACCGGATCGGCGAAGATGTGCGGATTCTCGCGCGCTTTATGCCCCAACCCGGACCCGGCA
ACGAGCCCGCGACCCCACCCGTTTCGAAATGA

Protein sequence :
MFSQTDFVHMERALALAKRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQDHAEIRALKDARSRGHDLRGATAYVTLEP
CSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAMLRDAGIEVRCGLLAHEAHELNIGFVSRMTRGRPWVRMKVA
ASLDGRTGLPSGDSQWITGEAARADGHAWRARASAILTGIGTVREDNPRMTVRAVDTPRQPQRVLIDSQLDVPPDAQILA
GASTLIFCGNLDGRHTDRAAALRDRGAEIVQLANPAGKVDLPAVLKVLGQRNVNELHVEAGYKLNGSLLREGCVDELLVY
LAPSLLGMDSMSMFNLSAPETLEGRVKLNFHAVDRIGEDVRILARFMPQPGPGNEPATPPVSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-62 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-62 44