Gene Information

Name : join (Bphyt_3074)
Accession : YP_001896690.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3467867 - 3469002 bp
Length : 1136 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: bps:BPSS2148a transposase

DNA sequence : 
ATGGGCAGACGGAACCTGACAGACGAGTTCAAGGCTGAGGCAGTGCAACTGGTGGTTGCGCAGGGCTATCCAATCACCAA
GGCCTGCGAGGCGTTGGGCGTGGGTGACTCGGCTTTGCGGCGCTGGGTGGCGCAGTGGCGTGCGCAGCAGGCTGAGCCGC
CACGCAGCGACGTGCAGATCCAGCGCGACCAGCGACGCATCCGTGAGCTGGAAGCGCGCGTGATGGAGCTTGAGCGGGAG
CGCGAGATACTAAAAAAGTCTACGGCCTTCTTCGTCAAGGAAATGGATCGCTCCTCGAAGTGATCCGTTCGCTGAAGAAG
GCCTGGCCGGTGAGTCTGATGTGCCGTTTGCTGAAGGTGCCGCGAAGCAGCTATTACGCCTTTGCTGCGCGGCCGCCCAA
ACCGGGCGCATCGCCTCCACTGCTGAAGGCCGTGCGTCAGATTCATAGCGAAAGCCGCAGCAGTTACGGCAGTCGCCGGA
TGGCGCAGGCACTGCAGCAGCAGGGTTATGCAATCGGACGCTACCGGGCGCGTTCACTGATGCGCGAGGCGCAACTGGCT
GTGGCCAGGCGGCGAACGCACCGGTATCGCAAGGCCGAGGGTGAAGCCCTGATTGCACCTAACCTGCTTGAGCGGCAATT
CGAGCCGGGCGCGATCAACCGGGTATGGGCAGGCGATATCACGTATGTGAGAACGCGTCAGGGGTGGTCCTATCTGGCCA
TCGTGATGGATCTGCACTCGCGCCGCATCGTAGGCTGGGCGTTCGCCTTGCAGGCGGATACGGAACTGGTCATCCAGGCC
CTACAGCAGGCCCGGCAGAAGCGGCGCCCGGCAGCCGGGCTGATGTTCCACTCCGATCAGGGCTGCCAGTACACCAGCGA
GCGCTTCGTGGGCGATCTGAAGGCGAACGGGATCGTCCAGAGCATGAGCAGAAAGGGGAATTGTTGGGACAACGCGGTGG
TCGAGCGCTTCTTCAGAAGCCTGAAGAGTGAATGGATTGGCGAACAGGAATACGGCAACCACGAACTCGCCCGCCGCGAT
ATCGCGGGCTACATCGCAGACTTCTACAACTACCGGCGCATTCATTCGGCGGCAAACAATCTGCCGCCAGTGCGGTACGA
AACTTCGATTTATTGA

Protein sequence : 
MGRRNLTDEFKAEAVQLVVAQGYPITKACEALGVGDSALRRWVAQWRAQQAEPPRSDVQIQRDQRRIRELEARVMELERE
REILKKVYGLLRQGNGSLLEVIRSLKKAWPVSLMCRLLKVPRSSYYAFAARPPKPGASPPLLKAVRQIHSESRSSYGSRR
MAQALQQQGYAIGRYRARSLMREAQLAVARRRTHRYRKAEGEALIAPNLLERQFEPGAINRVWAGDITYVRTRQGWSYLA
IVMDLHSRRIVGWAFALQADTELVIQALQQARQKRRPAAGLMFHSDQGCQYTSERFVGDLKANGIVQSMSRKGNCWDNAV
VERFFRSLKSEWIGEQEYGNHELARRDIAGYIADFYNYRRIHSAANNLPPVRYETSIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-49 43
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-49 43
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-49 43
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-49 43
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-49 43
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-49 43
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-49 43
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_001896690.1 transposase IS3/IS911 family protein VFG1122 Protein 2e-49 43