Gene Information

Name : Bphyt_0026 (Bphyt_0026)
Accession : YP_001893702.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 37034 - 39139 bp
Length : 2106 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: bxe:Bxe_A4439 heavy metal-(Cd/C

DNA sequence :
ATGCGCACCGCCATCCGCATCATGCAGATGGATTGCCCGACCGAAGAAGCGCTGATCCGCAAGAAATTCAGCCGCATGCC
ACACGTACGCAGCATGGAATTCAACCTGATGCAGCGCGTCCTGACGGTCGTCCACGCGCCCGAGGCGCTCGACTCGATCC
TCGCCGCGCTGCGTTCGCTCGACTTCACGCCCGAACTCGCCGATGCCGGGCCGAACGCCGCGTCCGGGGCCTCGGCCGCG
CCGCGCGCGCCGAGCAAGCCGTGGTGGCCGCTGGCGCTCGCCGGCATGGCTGCGGCAGGCTCAGAGGCCGCTGGCTGGCT
CGGCGCACCCGTTTGGCTGCCTGCGGGTCTGGCGATCCTCGCCATCCTCTCCTGCGGCCTTACGACGTACAAGAAGGGCT
GGCTCGCCATCCGCAACGGCAACCTGAACATCAACGCGCTGATGAGCATTGCCGTGACCGGCGCGCTGCTTCTGCGCCAA
TGGCCGGAAGCCGCGATGGTCATGGTGCTCTTCACCATCGCCGAACTGATCGAGGCGAAATCGCTCGACCGCGCCCGCAA
CGCGATCCAGGGTTTGATGCAACTCACGCCTGAACAAGCGAGCGTGCAGCAACTCGACGGCAGTTGGCGATTGGTGGACC
TCAAGGCCATTGCGCTCGGCGCGGTGGTTCGCGTGAAGCCGGGCGAGCGGATCGCGCTGGACGGCGAAATCGTCGCGGGC
CGCTCGAGCGTGGATCAGGCGCCGATCACCGGCGAAAGCCTGCCGGTCGACAAAGCCGTGGGTGACGCGGTGTTCGCCGG
CACGATCAATCAGACCGGCTCGTTCGACTATCGCGTCACCGCCGCGGCCAGCAATACGACACTCGCACGCATCATCCACG
CAGTTGAAGAAGCGCAAGGCACCAAGGCGCCGACGCAGCGTTTCGTCGACCAGTTCGCCCGCGTGTATACGCCGATCGTG
TTCGCCGTCGCGCTTGCCGTGGCCATTGTGCCGCCGCTGCTGTTCGACGGATCGTGGCAGGCGTGGGTCTACAAGGCGCT
GGTCATGTTGGTGATCGCGTGCCCGTGCGCGCTCGTGATCTCGACGCCGGTGACCATCGTCAGCGGTCTCGCTGCGGCGG
CCCGCAAAGGCATTCTGATCAAAGGCGGCGCCTATCTCGAGCAAGGCCGCAAGCTAACGCGGCTGGCGCTCGACAAAACC
GGCACGCTCACTCACGGCAAGCCCGTGCAGACCGAGTTCGAAATACTCGCTGAGATCGACGCCCTGCGTTGCCGCACGCT
TGCGGCGAGTCTTTCGGGGCGCTCCGATCATCCTGTCTCGATGGCGATTGCGACGGCGGCGAAGGCCGATGGCCTGAAGC
ACATCACTGTCGCGGCCTTCGAGGCAATCGCGGGACGCGGCGTGCGCGGCGAGATAGACGGCGTGCCGTACTGGCTCGGC
AACCATCGGCTGATCGAAGAACTGGGACGCTGCTCCGCGTCGCTCGAAGCGCGGCTGGATGCGCTCGAAAGTCAAGGCAA
GACCGTCGTGATGCTGGTGGACGCCGAACGCGTGCTCGCGCTGTTCGCGGTCGCCGATACGGTGAAGGAAACCAGCCGCG
CAGCCATCGCCGAGTTGCAGCGGCTCGGCGTGAGCACGGCCATGCTCACCGGCGACAACCCGCACACCGCCGCCGCGATC
GCGCAACAGGTCGGTATCGACGAAGCGCGCGGCAATCAGCTGCCGGAAGACAAACTAAACGCAGTCGCGCAGTGGTCGGA
CGACGGCGCGACGGTCGGCATGGTCGGCGACGGCATCAACGACGCGCCCGCGCTCGCCCGCGCCGACATCGGTTTCGCGA
TGGGCGCGATGGGCACCGACACGGCGATCGAAACCGCCGACGTCGCGCTGATGGACGACGACCTGCGCAAGATCCCGTCG
TTCATTCGTCTGTCGAAGGCGACGCATGCGGTGCTGGTGCAGAACATCACGCTCGCGCTCGGCATCAAGAGCGTCTTCCT
CGTGCTGACCGTAATCGGTCTGGGCACGATGTGGATGGCCGTGTTCGCCGACGTGGGCGCGAGTCTGCTAGTGGTGGCAA
ACGGGTTGCGGCTGTTGCGCAAATGA

Protein sequence :
MRTAIRIMQMDCPTEEALIRKKFSRMPHVRSMEFNLMQRVLTVVHAPEALDSILAALRSLDFTPELADAGPNAASGASAA
PRAPSKPWWPLALAGMAAAGSEAAGWLGAPVWLPAGLAILAILSCGLTTYKKGWLAIRNGNLNINALMSIAVTGALLLRQ
WPEAAMVMVLFTIAELIEAKSLDRARNAIQGLMQLTPEQASVQQLDGSWRLVDLKAIALGAVVRVKPGERIALDGEIVAG
RSSVDQAPITGESLPVDKAVGDAVFAGTINQTGSFDYRVTAAASNTTLARIIHAVEEAQGTKAPTQRFVDQFARVYTPIV
FAVALAVAIVPPLLFDGSWQAWVYKALVMLVIACPCALVISTPVTIVSGLAAAARKGILIKGGAYLEQGRKLTRLALDKT
GTLTHGKPVQTEFEILAEIDALRCRTLAASLSGRSDHPVSMAIATAAKADGLKHITVAAFEAIAGRGVRGEIDGVPYWLG
NHRLIEELGRCSASLEARLDALESQGKTVVMLVDAERVLALFAVADTVKETSRAAIAELQRLGVSTAMLTGDNPHTAAAI
AQQVGIDEARGNQLPEDKLNAVAQWSDDGATVGMVGDGINDAPALARADIGFAMGAMGTDTAIETADVALMDDDLRKIPS
FIRLSKATHAVLVQNITLALGIKSVFLVLTVIGLGTMWMAVFADVGASLLVVANGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 66
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 9e-122 47
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 8e-122 47
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-122 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_0026 YP_001893702.1 ATPase P BAC0298 Protein 0.0 69
Bphyt_0026 YP_001893702.1 ATPase P BAC0461 Protein 2e-88 45
Bphyt_0026 YP_001893702.1 ATPase P BAC0455 Protein 7e-91 42