Gene Information

Name : Bphyt_2197 (Bphyt_2197)
Accession : YP_001895821.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2479758 - 2480417 bp
Length : 660 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A2066 QseB, two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCGTACTCCTCGTAGAAGACGACGATCTGATCGGCTGCGGCATCGAAGCAGGACTGCGTCAGGCGGGCTTCACGGT
CGACTGGGCGCGCGACGGCCACAAGGCGGGTCTCGCGCTCGACACCACCGCCTACGCGCTGGTGCTGCTCGATCTCGGCC
TGCCCCGCGTATCGGGAATGGAGCTGCTGAAACGGCTGCGCGATTCAGGCAAGGACGTGCCGGTGCTGGTGCTGACCGCG
CGCGGCACGGTGGTCGACCGTGTCGGCGGCCTCGAAGCGGGCGCCGACGACTATCTCGGCAAGCCCTTCGATCTGACCGA
ACTGATCGCCCGTTGCCGGGCCCTGTTGCGCCGCGCACAGGGCCGCAGCGTCGAGCAGATCCGCTATCAGGACCTGACCG
TCAACCCGGCCGCGCAAACCGTCGAAGTGGGCACGACACGCGTGCCGCTCACTTCGCGCGAATGGGCGATCCTGTTGCAG
TTGCTGACCAATCAGGGAATTCCCCAGTCGCGCTCGCGGCTCGAAGAAAGCCTGTATGGCTGGCAGGAAGAAATCGAGAG
CAACGCAATCGAGGTGCACGTGTCCAATCTGCGCAAGAAACTCGGCGCCAAGCTGATCAAGACGGTGCGCAATATCGGCT
ACGTGGTGGAGAAAGAATGA

Protein sequence : 
MRVLLVEDDDLIGCGIEAGLRQAGFTVDWARDGHKAGLALDTTAYALVLLDLGLPRVSGMELLKRLRDSGKDVPVLVLTA
RGTVVDRVGGLEAGADDYLGKPFDLTELIARCRALLRRAQGRSVEQIRYQDLTVNPAAQTVEVGTTRVPLTSREWAILLQ
LLTNQGIPQSRSRLEESLYGWQEEIESNAIEVHVSNLRKKLGAKLIKTVRNIGYVVEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-30 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator BAC0347 Protein 7e-27 45
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator BAC0487 Protein 7e-34 45
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-26 43
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator BAC0308 Protein 6e-24 42
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-24 41
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 4e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-28 42
Bphyt_2197 YP_001895821.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-31 41