Gene Information

Name : Bphyt_0196 (Bphyt_0196)
Accession : YP_001893853.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 211204 - 212040 bp
Length : 837 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: rso:RSp0953 transposase/IS protein

DNA sequence :
ATGACGCCGCAGCTCGAACGACTGACTGTGTTGTGCAAGCAGCTCAACCTGCTGCACTTGCCGACACAGATTGCGCACCT
CGGCCAGATGGCCGCCAAACGCGAGCTCGGCTATCTCGACTTCCTCGAACAGGCCTTGAAGGATGAAGCGATGGCACGCG
CGGAGCGAATGCGCCGGATGCTGACGCGTCTGGCTGGATTCCCGGCAATCAAGACGCTTGATGAATTCGACTTCGAATTC
GTGCTCGGCGTACCGAAAGCATTGGTTCTCGAACTCGGCAGTCTTGCCTTTGTGGAGCGTGCCGAGAATGTCGTGCTGCT
CGGACCCAGTGGCGTTGGCAAAACCCATCTTGCCGTCGCGCTTGGATATCGTGCAACGCAGGCCGGATTTCGCACCCGCT
TCATTACTGCCGCCGATCTGCTGATGCAATTGACGACAGCGTTGCGGCGTAACCAGCTGGAGGAAACTATCAAGCGGATC
ACGAAGCCATACAGGCTTCTGATCATTGACGAGATGGGGTATCTGCCCATGGACCGGGAGCAGGCGAACCTGCTCTTCCA
GGTGGTCGCCAAACGGTACGAAACCGGAAGTCTCATCCTGACCAGCAATCTTCCGTTCGGCCAGTGGGACCAGACCTTCG
CTGACGATGCAACGCTCACGGCGGCGCTCCTCGACCGGCTGCTTCATCACGCACACGTCGTGCCGATCTCCGGCGACTCG
TACAGGCTGAAGGAAAAACGTCAGGCCGGCATGATCAACCGCATCCCACCACCGCACCTGAACGACGCGGACGATGTCAA
ACGCAAACGCAACTCGAAGGAGGCAGCACTCAGCTAA

Protein sequence :
MTPQLERLTVLCKQLNLLHLPTQIAHLGQMAAKRELGYLDFLEQALKDEAMARAERMRRMLTRLAGFPAIKTLDEFDFEF
VLGVPKALVLELGSLAFVERAENVVLLGPSGVGKTHLAVALGYRATQAGFRTRFITAADLLMQLTTALRRNQLEETIKRI
TKPYRLLIIDEMGYLPMDREQANLLFQVVAKRYETGSLILTSNLPFGQWDQTFADDATLTAALLDRLLHHAHVVPISGDS
YRLKEKRQAGMINRIPPPHLNDADDVKRKRNSKEAALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-56 57
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-56 57
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-56 57
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-56 57
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-56 57
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-56 57
unnamed CAA21402.1 - Not tested HPI Protein 3e-56 57
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-56 57
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-56 57
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-56 57
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-56 57
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-56 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_0196 YP_001893853.1 transposase/IS protein VFG1515 Protein 1e-56 57
Bphyt_0196 YP_001893853.1 transposase/IS protein VFG1627 Protein 1e-56 57
Bphyt_0196 YP_001893853.1 transposase/IS protein VFG1606 Protein 1e-56 57
Bphyt_0196 YP_001893853.1 transposase/IS protein VFG1663 Protein 2e-56 57