Gene Information

Name : Bphyt_1312 (Bphyt_1312)
Accession : YP_001894951.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1471557 - 1472255 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A3248 two component transcriptional regulator, winged helix family, KdpE

DNA sequence :
ATGAGTGACCCGAGCATCACCGTCGTCCTGATCGAAGATGAAAAGCAGATTCGCCGCTTCGTGCGAACGGCGCTGGAAGG
CGAGGGCATCGTCGTGCATGACGCCGAGACCGGCAAGCAGGGTCTCGTCGAAGCCGCGACGCGCAAGCCCGATCTGGTGA
TCGTCGATCTCGGCCTGCCCGACACCGACGGTCTCGACGTGATCCGCGAACTGCGCGGCTGGAGCGAGTTGCCGGTGATC
GTGCTGTCGGCGCGTACCCAGGAAAGCGAAAAAGTCGCCGCGCTCGATGCCGGCGCGGACGATTACCTCACCAAGCCGTT
CGGCGTGTCCGAGTTGCTGGCGCGGATTCGCGCGCATATGCGGCGCCGGAATCAGGGCGGCGCCAACGAAACACCGCAGG
TGCGCTTCGGCACGGTGACCGTCGATCTGGCCTTGCGGCAGGTGAGCCGCGACGGCGCGGTGGTCCATCTGACGCCGATC
GAGTACCGGCTGCTCGCGACGCTGGTGCGCCATGCCGGCCGCGTGCTGACGCATCGCCAATTGCTGCGCGAGGTGTGGGG
GCCGTCGCATGTCGAGAGCCATCACTATTTGCGCATCTATATGGCGCATCTGCGCGGCAAGCTGGAGCGCGACCCGGCGC
AACCGGAGCACATCATCACGGAAACGGGTGTCGGATACCGGCTGGTGGGCGCGATTTGA

Protein sequence :
MSDPSITVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLPDTDGLDVIRELRGWSELPVI
VLSARTQESEKVAALDAGADDYLTKPFGVSELLARIRAHMRRRNQGGANETPQVRFGTVTVDLALRQVSRDGAVVHLTPI
EYRLLATLVRHAGRVLTHRQLLREVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIITETGVGYRLVGAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 5e-41 44
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-41 44
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 1e-33 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 1e-33 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-33 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 1e-33 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-33 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_1312 YP_001894951.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-36 42