Gene Information

Name : Rpic_4809 (Rpic_4809)
Accession : YP_001893320.1
Strain :
Genome accession: NC_010678
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1148076 - 1150427 bp
Length : 2352 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rso:RS

DNA sequence :
ATGAAACCGGATCACGCCCCCTCCCTGCCTTCCCGCGACCATGCCGCCAAGCCGGAAACGTCCGGCTGTGGTGGGTGCTG
CGTCCACTATCAGTTGGTTGCGACAGACACCTCCCGTCATGCTCATGACCACGATCACAACCACGCGCACGAAGCGGATG
CGCCTGTTGATGCCGCCGCACGCGCCAGGGCCAGCGGCCGCACGACCGTGCGCATCGAGCAGATGGACTGCCCGACCGAG
GAGCGCATGATCCGCACCAAGCTGGGCAGCGCCGAGGGTGTGGTCGCGCTGGAGTTCAACCTGCTGGAGCGCCATCTCAC
CATCCATCACACCGTAGATGACGTGACGCCCTTCCTCGAAGCATTGCGCGCCATCGGCATGGGTGGCGAGGTGCTGGAAG
CGCACGATCGCGCTGCCGCCGCGCCTGCGGAACCTGCCGGCATCTCGCGCCGCACGTGGCTGCTGGGCGCGGGCGGCGTG
GCCGCGTTTGGCGCCGAGGTCATCGCCTGGTCGCTGGGTGATCATGCATGGCCGGTGCTGGCCTTGGCGCTGGCCTCCAT
CGCGCTGGCCGGCGGCCCGACGCTGCGCAAGGGCTGGATTGCCTTGCGCGCGCTCACGTTCAACATCAACTTCCTGATGG
CGGTGGCCGTGATCGGCGCGCTGCTGATCGGCAAGTGGGCCGAGGCGGCCATGGTGATCTTCCTGTTTGCCGTGGCGGAG
GCCATCGAGGCCCGTGCGCTCGTGCGCGCCCGCGATGCAGTGCGCGCGCTCACCGCCATTGCGCCCGACACTGCAGAACT
GGCTGACGGCAATGGCGGATGGCGCGACGTGGCGGTTGAAGCAGTCGGCATCGGCGCGCGCCTGCGTGTGCGGACGGGCA
GCCGCGTGCCGGTCGACGCGCGCATTGTCAGCGGCCGTGCGGCGCTCGACGAATCCCCCGTGACCGGCGAGAGCCTGCCA
GTGGAGAAGACCATTGGCGACATCGTCCTCGCCGGCACCATCGTCACCGATGGCGTGATCGAGGCGCAGGCCACGGCCGT
GGCGGCCGACAGTACGCTTGCCCGTATTGCCGGCGCCATCCAGCAAGCGCAGGCGCAGCGCGCGCCCACGCAGCGCTTTG
TCGACCGGTTTTCGTCCATCTACACGCCGGCGATGATGGTGCTGGCGCTGGCGGTTGCCGTCATCGGGCCGCTGGTCACT
ACCGAAGGCTGGCTGGCGTGGACGTACCGCGCGCTCGTGCTGCTGGTGATTGCCTGCCCGTGCGCGCTGGTCATTTCCAC
ACCCGTGACGGTCGTGAGCGGCCTGGCTGCGGCTGCGCGGCGTGGCATCGTCGTCAAGGGTGGCGTCTATCTGGAGAGTG
GCAGGCGCCTGCGCGCGCTGGCGCTTGACAAGACCGGCACGCTCACCACAGGGCGCCCCGTGCTTGACGCCGTGATGCTG
CCGGACGGTTCGCGCCGAGCCGTCGCTGAACTGCATGCAACGACGGACGCGGCACACCTGCGCGCGCTTGCGGTGGCTGC
AGCGCTGGACGCCAACACGACACACCCGATTGCGGTGGCGATCGTGCAGGCCGCAGCCGCACACGGCGCGGTCGCGGCAG
GCGCCATCCAAGACCTTTCCGTGCTGCCTGGTCATGGTGTGGCCGGCACGCTCGGCGGCGTGCGCTGGCATCTTGGGAAC
GCGGCCCTCGTGGCAGACCGCGGCTTCGATACGTCGGCCTGGCGCGCGGCGGCCGATCGGCTGCAGGCCGAGGGCATGTC
CGCCGTCACGCTGTGCGATGCAGGCGGCGCCGTGGCCTTGTTCGGCGTGCGCGACCGCGAGCGCCCGGAAAGTGCCCAGG
CCATCGCCGATTTGCGCGCGCTGGGCGTGCTGCCTGTCATGATTACCGGGGATGACCGCCGCGCGGCGCAGGCGATCGCC
AGGACGGTCGGTATCGATCAGGTGCGCGCAGAACAGCTGCCCGAAGACAAGCAGCGCGTGGTTGGGGAACTTGCCGCGCA
GCATGGTTCCGTCGGCATGGTGGGCGATGGCATCAACGACGCACCGGCGCTTGCGCGTGCCGATATTGGCTTTGCCATGG
GCGCGGCCGGTACCGCAACGGCGCTCGAAGCCGCCGATGTCGCCATCATGGACGACGACCCGCGCAAGCTCGCGAGCTTC
ATCCGCATCAGCCGTCGCACGGTTGCGGTGCTGCGTCAGAACATTGCCCTGGCGCTGGGCATCAAGGCTGTGTTCCTCGC
GCTCGCGGTGATGGGCGAGGCTACGCTGTGGATGGCGATCTTCGCCGATGTGGGCGCAAGCCTGCTGGTCGTCTTCAACG
GGCTGCGGGTGATGCGCACGCGCGCTGCGTGA

Protein sequence :
MKPDHAPSLPSRDHAAKPETSGCGGCCVHYQLVATDTSRHAHDHDHNHAHEADAPVDAAARARASGRTTVRIEQMDCPTE
ERMIRTKLGSAEGVVALEFNLLERHLTIHHTVDDVTPFLEALRAIGMGGEVLEAHDRAAAAPAEPAGISRRTWLLGAGGV
AAFGAEVIAWSLGDHAWPVLALALASIALAGGPTLRKGWIALRALTFNINFLMAVAVIGALLIGKWAEAAMVIFLFAVAE
AIEARALVRARDAVRALTAIAPDTAELADGNGGWRDVAVEAVGIGARLRVRTGSRVPVDARIVSGRAALDESPVTGESLP
VEKTIGDIVLAGTIVTDGVIEAQATAVAADSTLARIAGAIQQAQAQRAPTQRFVDRFSSIYTPAMMVLALAVAVIGPLVT
TEGWLAWTYRALVLLVIACPCALVISTPVTVVSGLAAAARRGIVVKGGVYLESGRRLRALALDKTGTLTTGRPVLDAVML
PDGSRRAVAELHATTDAAHLRALAVAAALDANTTHPIAVAIVQAAAAHGAVAAGAIQDLSVLPGHGVAGTLGGVRWHLGN
AALVADRGFDTSAWRAAADRLQAEGMSAVTLCDAGGAVALFGVRDRERPESAQAIADLRALGVLPVMITGDDRRAAQAIA
RTVGIDQVRAEQLPEDKQRVVGELAAQHGSVGMVGDGINDAPALARADIGFAMGAAGTATALEAADVAIMDDDPRKLASF
IRISRRTVAVLRQNIALALGIKAVFLALAVMGEATLWMAIFADVGASLLVVFNGLRVMRTRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 6e-137 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_4809 YP_001893320.1 heavy metal translocating P-type ATPase BAC0298 Protein 9e-130 53
Rpic_4809 YP_001893320.1 heavy metal translocating P-type ATPase BAC0461 Protein 3e-62 42