Gene Information

Name : Bphyt_6193 (Bphyt_6193)
Accession : YP_001889891.1
Strain :
Genome accession: NC_010676
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2444414 - 2447206 bp
Length : 2793 bp
Strand : -
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1382 ATP-dependent protease Clp, ATPase subunit

DNA sequence :
ATGGCCGCCCTTTGCGAAATCTGTAACGCCCGTCCCGCTGTCGCCCGTGTGACCGTTGTGCAGAACGGCGAGCGGAAAAC
TTTATCGATCTGCGATTACGACTATCGGCAATTAATGCGGCACCAAAGCATGGCGAACCCGTTCGACTCGCTGCTCGGAG
GAGGCGGTCTGTCCCGCTTCTTCGGCGGTCTTGGCGGCGCGGGCGCCGGCGCCGGCGCGGAAGATGATGACGAAGAAGAA
TTGGCCGCGGAGTTGCCGCGCGAATCGGTCGACGCCACCGACGCCTTCAGCGAGCAGACGCTCGAATTGTTGCAGCGCGC
GGCAGAGAAAGCGCACGAACTCCAGCGAAACGAACTTGACACCGAACATCTGCTGTACGTACTAGCGGACAACGATGTCG
GCACCGCGCTGCTGAAGGAACTCAAACTCTCGCCGCAGGATATTAAAGGGTACATCGACCAGCATGCGCAGAAGGGAAAC
GCGAGCCCCGATACGCCGATGGACAAGATGACCATCTCGCCGCGCATGAAGAAAGTGATCCAGAGCGCGTTCCAGGCATC
GCGCGATCTGGGTCATTCCTACATCGGGCCCGAGCATCTGCTCATCGGGCTTGCGGCGGTGCCGGACAGTATTGCGGGCA
CCTTGCTGAAGAAGTACGGCGTGACACCGGAAGCGCTGCGGCAGAAAGTGGTGAAGGTAGTCGGCAAAGGCGCCGAGGAT
GGCCGCGTCGACACGCCGACCGGCACGCCCACACTCGACAAGTTCGGCCGTGATCTCACGGCTCTGGCGCGGCAGGGCAA
GCTCGACCCGGTGCTGGGTCGTGCGCAGGAAATCGAAAGCACGATTGAAGTACTCGCGCGGCGCAGGAAGAACAATCCGG
TGTTGATCGGCGAACCGGGGGTCGGCAAGACCGCGATCGTCGAAGGCCTGGCGCAGCGTATCGTCAACGACGAAGTTCCC
GAAAATCTGCGCGGCAAGCGGCTCGTCGAGGTCAATATCAATTCGATGGTGGCGGGTGCGAAGTATCGCGGCGAGTTCGA
AGAACGCGCAAAAACGCTGATCGACGAAGTGACGGCGAAGAAAGACGAACTGGTTCTATTCATCGACGAATTGCACATGA
TCGTGGGCGCAGGCCAGGGCGGCGGCGAAGGCGGCCTCGACGTCGCGAACGTGCTCAAACCGGCGCTGGCCCGTGGCGAA
CTCAGCCTGATCGGCGCGACGACGCTCAACGAATACCAGAAGTACATCGAAAAAGACGCAGCGCTCGAGCGGCGCTTTCA
GCCGGTGCTGGTGCCCGAGCCGACCGTCGAGCAGACCATCGTCATCTTGCGCGGTCTGCGCGACAAGCTCGAAGCGCATC
ATCAGGTGACCTTTGCGGACGATGCGTTCGTCGCCGCCGCGGAGATGTCGGACCGTTACATCACATCGCGCTTTCTCCCC
GACAAAGCCATCGACCTGATCGACCAGGCTGCCGCGCGCGTGCGCATCGGCGCCACCTCGCGCCCGGCCGACATCCAGGA
ACTCGAAGCCGAAATCGCCCAGCTCAAGCGCGAGCAGGACTATGCGTCCTCGCGCAAGCGCTACGACGAGGCGAAGAAGT
TCGAGGAGCGTATCGGCGAAAAGCAGTCGAAACTCGATGAGCAGATGGAGGCATGGCAGCGCAAGACCGGTTCGGAAACG
CTTGAAGTGACGGTGGCGGCCATCGCCGAAGTAGTGTCGCGCCAAACCGGCATTCCGGTCACCGATCTGACACAGGAGGA
GCGTCAGAAACTGCTGGACATGGAGAACAAACTGCGCGAGCGCGTGGTTGGCCAGGACGACGCGGTGCTTGCCGTGAGCG
ACGCCGTGCGCCTGTCGCGCGCCGGACTTGGCCAGGCGAACCGGCCTATCGCGACCTTTCTGTTTCTCGGACCGACCGGC
GTCGGCAAGACCGAGCTCGCGAAGGCCCTGGCGGAAACCGTGTTCGGCGATGAGCAGGCGGTGATCCGTATCGACATGTC
GGAATATATGGAGCGTCACGCGGTGGCGCGGTTGATCGGCGCGCCTCCGGGCTATGTCGGGTATGACGAGGGCGGCCAGT
TGACCGAGCGCGTCCGGCGGCGCCCGTACAGCGTGATCCTGCTCGACGAGATCGAGAAAGCCCACGCGGACGTGAGCAAC
GTGCTGCTCCAGGTATTCGACGACGGCCGGCTGACCGACGGCAAGGGTCGCGTGGTGGACTTCAGCAACACGATCATCAT
CGCGACCAGCAATCTCGGCGCACACATCATCATGGATAACCTCGAGAAGCTCGAGGCGGACCAGTTGCCGGAGAAGAAGC
TTCGCGAAGAACTGATGGATGTGCTGAAGGGCCACTTCCGCCCGGAATTCCTTAATCGTATCGACGAGGTGATCGTCTTC
CACGGGCTTTCTCGCGAGAATATCCGCTCGATCGTGCAGATCCAGCTCGAACGGGTCATACGCACGGCGGCGGCCCAGGA
CATCACGCTCAAGATGGACGAGTCGATTCTCGACCATCTTGCCGACGCCGGCTACCGGCCCGAGTTCGGTGCCCGCGAAC
TGAAGCGGCAGATCCGCCAGGAACTGGAAACGCGGCTTGCCAAGGAGATTCTCGGCGGTAAGCTGAAATCGGGCGACAGT
GTCGAGGTCAGCTACGACAAGGACAGCGGCGAAGTGAAGTTCGTTCGCGACGAGGCGCCGCCGCCCAAGGCGAAGCGCGT
CAATGGCCGGGCCAAGAAGAAGTCGTCCGACGAAGTCGGCAGCACCGAGTCCACGGAGGGCGCCGGGTCCTGA

Protein sequence :
MAALCEICNARPAVARVTVVQNGERKTLSICDYDYRQLMRHQSMANPFDSLLGGGGLSRFFGGLGGAGAGAGAEDDDEEE
LAAELPRESVDATDAFSEQTLELLQRAAEKAHELQRNELDTEHLLYVLADNDVGTALLKELKLSPQDIKGYIDQHAQKGN
ASPDTPMDKMTISPRMKKVIQSAFQASRDLGHSYIGPEHLLIGLAAVPDSIAGTLLKKYGVTPEALRQKVVKVVGKGAED
GRVDTPTGTPTLDKFGRDLTALARQGKLDPVLGRAQEIESTIEVLARRRKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVP
ENLRGKRLVEVNINSMVAGAKYRGEFEERAKTLIDEVTAKKDELVLFIDELHMIVGAGQGGGEGGLDVANVLKPALARGE
LSLIGATTLNEYQKYIEKDAALERRFQPVLVPEPTVEQTIVILRGLRDKLEAHHQVTFADDAFVAAAEMSDRYITSRFLP
DKAIDLIDQAAARVRIGATSRPADIQELEAEIAQLKREQDYASSRKRYDEAKKFEERIGEKQSKLDEQMEAWQRKTGSET
LEVTVAAIAEVVSRQTGIPVTDLTQEERQKLLDMENKLRERVVGQDDAVLAVSDAVRLSRAGLGQANRPIATFLFLGPTG
VGKTELAKALAETVFGDEQAVIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHADVSN
VLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAHIIMDNLEKLEADQLPEKKLREELMDVLKGHFRPEFLNRIDEVIVF
HGLSRENIRSIVQIQLERVIRTAAAQDITLKMDESILDHLADAGYRPEFGARELKRQIRQELETRLAKEILGGKLKSGDS
VEVSYDKDSGEVKFVRDEAPPPKAKRVNGRAKKKSSDEVGSTESTEGAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-166 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_6193 YP_001889891.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 51