Gene Information

Name : Bphyt_6109 (Bphyt_6109)
Accession : YP_001889809.1
Strain :
Genome accession: NC_010676
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2349850 - 2351322 bp
Length : 1473 bp
Strand : +
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSp1611 probable succinate-semialdehyde dehydrogenase oxidoreductase protein

DNA sequence :
ATGTCTCTCGCATTGACACGCAATGAACTGATTCGCCCGCAGAACCTGATCGACGGAGCATGGACCGGCGCCGCCGACGG
CGCCCGCTTCGCCGTCACCAACCCGGCCACCGGCGAGACGATTGTCGAAGTCGCCGACAGCGGCGCCGCTGACGCGCGCG
CCGCCACCGACGCCGCAGCCCGCGCGTTCCCCGCCTGGCGCGACACGCTGCCTCGCGAGCGCGCCGAGATTCTGCGCCGC
TGGCATGCGCTGATCGTCGCCAATACCGACGACCTCGCGAAGCTGATGTCGATGGAACAGGGCAAGCCGCTCGCGGAGGC
CCGCGGCGAAGTCGCTTACGGCGCGTCGTACGTGGCCTGGTTCGCCGACGAAGCGACCCGCATCTACGGCGATCTGATTC
CGCAACAGCAGCGCGGCAAGCGCATGAGCGCGGTGAAGGAACCGGTCGGCGTAATCGCCGCGATCACGCCGTGGAATTTC
CCGCTGGCGATGATCGCCCGCAAGATCGCGCCCGCGCTCGCGGCGGGTTGCACCGTGGTCGCCAAGCCCGCCGAAGACAC
GCCGCTCACCGCCCTCGCCCTCGCCGTGCTCGCTCAGGAAGCTGGTCTGCCAGACGGCGTGCTGAACATGCTGTCGGCGT
CGCGCGAACAAGGCATTGCCGCCGTTGCCGATTGGCTCGCCGACTCGCGGGTGCGCAAAATAACCTTCACAGGTTCGACG
CCGGTTGGCAAGCATCTCGCGCGCGAATCCGCGGGCACGCTGAAGAAGCTCTCGCTGGAATTGGGCGGTAACGCGCCCTT
CATCGTGTTCGACGACGCCGATCTCGACGCGGCCGTCACCGGCCTGATGGCAGCGAAATTCCGCAATGGCGGCCAGACCT
GCGTGTGTCCGAACCGCGTCTATGTGCAGGCGGGTGTCTATGAGCGCTTCGCCGATCTGCTCGCGAAACGCGTCGGCGCG
CTGAAAGTTGCGCCTGCAACCGACCCGCAAGCGCAAATCGGTCCGATGATCAACGAGCGCGCGATCCAGAAGATTGCCCG
TCACGTGGAAGACGCCGTCAAACACGGCGCGAAGGTGCTGGTGGGCGGCAAGCGCCTGACCGAACTCGGCCCGAACTACT
ACGCGCCGACCGTGCTGACGGACGCGCGGGACGACATGCTCGTCAGCTGCGAGGAGACCTTCGGCCCGGTCGCGCCGCTA
TTCCGTTTCAACGAAGAAGCCGAAGCGATCCGTCTCTCCAACGACACGCCGTTCGGCCTGGCCGCCTACTTCTATACGCA
GGACGTGAGGCGTATCAATCGCGTGGCCGCGCAACTCGAAGCGGGGGTAATCGGCATCAACGAAGGCGCGGTGTCGAGCG
AAGCGGCGCCGTTTGGCGGCGTGAAGGAATCGGGCTATGGCCGCGAAGGGTCGAAGTATGGACTCGACGACTACATGTCG
ATCAAATACATGTGCCAGGGCGGGCTTGATTGA

Protein sequence :
MSLALTRNELIRPQNLIDGAWTGAADGARFAVTNPATGETIVEVADSGAADARAATDAAARAFPAWRDTLPRERAEILRR
WHALIVANTDDLAKLMSMEQGKPLAEARGEVAYGASYVAWFADEATRIYGDLIPQQQRGKRMSAVKEPVGVIAAITPWNF
PLAMIARKIAPALAAGCTVVAKPAEDTPLTALALAVLAQEAGLPDGVLNMLSASREQGIAAVADWLADSRVRKITFTGST
PVGKHLARESAGTLKKLSLELGGNAPFIVFDDADLDAAVTGLMAAKFRNGGQTCVCPNRVYVQAGVYERFADLLAKRVGA
LKVAPATDPQAQIGPMINERAIQKIARHVEDAVKHGAKVLVGGKRLTELGPNYYAPTVLTDARDDMLVSCEETFGPVAPL
FRFNEEAEAIRLSNDTPFGLAAYFYTQDVRRINRVAAQLEAGVIGINEGAVSSEAAPFGGVKESGYGREGSKYGLDDYMS
IKYMCQGGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-128 57
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-78 44