Gene Information

Name : Bphyt_5207 (Bphyt_5207)
Accession : YP_001888936.1
Strain :
Genome accession: NC_010676
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1383596 - 1384924 bp
Length : 1329 bp
Strand : -
Note : KEGG: bxe:Bxe_A3118 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase

DNA sequence :
ATGAACGATGAGATAAAGACGTTGATGTCAGAGCATTCCCTGCTTTCAAGCCGTCCCGTGCCGAGCGCGCGGATCGTCGA
AGCGCGGGGTGTCGTCGTGCGCGTGGTGGGTGCCTCGTTGCGCATCGGCGAAATGGTGCGGCTCATGCGGCCCGATCGCG
CAGAACCACAGATCGGGGAAGTGGTGGGCTTTTCGCAGGAGGGGGCGCTGGTCGTGCCGCTCGACGGACTGGCGGGATTG
TCGGACATTACACAGGTGGAGGGCTGCGGGCTCAGCTGGGGACGTCTCGATGCGCTCGATATGCTCGGACGGGTCGTCGA
TGGGCTGGGCCGGCCGCTCGATGGCCGCGTGGCCCCGAAAGCCGTCAGTGCTCAACACTCAATGAATATCTTGTCGCATA
TCAATCCGCTCGACCGCCCAGTCATCTCGACGCCATTCCCAACGGGTGTACGGGTAATCGATGGTCTCTTGTCCTGCGGA
GTCGGTCAGCGAGTCGGCATCTTTGCGGCGGCGGGCGGAGGCAAGAGTACGCTGATGGGCATGATCGCCAATGGGGCGAG
CGTGGATGCAATTGTTGTTGCACTGATTGGCGAACGGGGTCGTGAAGTGGGCGAGTTCATTCATGATCACCTTGGCGCGC
GGCGCGCATCGTCGATTGTGATCGCATCGACGTCCGAGCGGCCTGCGGCGGAGCGCATCAAGGCGGCCGAACTGGCTTGC
CGAGTCGCGAGCGATTTGCGCGCCGAGGGAAAGCACGTGTTGCTGCTGTTCGATTCCCTCACGCGCTACGCCCGGGCGTT
GCGCGAGGTTGGTCTCGCGGTTGGCGAGCCGCCCGTGCGGCGAGGCTACCCGCCACGCGTGTTCGCCGAACTGCCGCGCC
TGATCGAGACCGCGGGGCTTACACGTCAGGGCGCGGTCACCGCGTTCTTTACGGTGCTGGCCGAAGACGAGGAGATGTCC
GATCCTGTCGCGGAGGAAGCTCGCTCGTTGCTCGACGGTCATATTCAGCTGTCGGGGCGCCTCGGTGGGGCGGGACATTA
CCCGGCTATCGACGTGTTGAAAAGCAAGAGCCGCGTCATGACACGCGTGACGAGCCGCGCGCATCGAGATGATGCCGGCC
GCGTGCGCGGCTGGATGAGCCGATATCAGGAAGTGGAACTGTTGCTGCAGATTGGCGAATATCGTCGCGGCAACGATTCT
GCGAGCGATCTTGCGATCGACCGGCATGAAATGATCGAGCGCTTTTTGCGGCAGCGTCACGACGAGTATTCGGACTGGGA
GGCAACGATTGGATCGTTAAGCGCGCTTTGTCATGGGTCGCACGAATGA

Protein sequence :
MNDEIKTLMSEHSLLSSRPVPSARIVEARGVVVRVVGASLRIGEMVRLMRPDRAEPQIGEVVGFSQEGALVVPLDGLAGL
SDITQVEGCGLSWGRLDALDMLGRVVDGLGRPLDGRVAPKAVSAQHSMNILSHINPLDRPVISTPFPTGVRVIDGLLSCG
VGQRVGIFAAAGGGKSTLMGMIANGASVDAIVVALIGERGREVGEFIHDHLGARRASSIVIASTSERPAAERIKAAELAC
RVASDLRAEGKHVLLLFDSLTRYARALREVGLAVGEPPVRRGYPPRVFAELPRLIETAGLTRQGAVTAFFTVLAEDEEMS
DPVAEEARSLLDGHIQLSGRLGGAGHYPAIDVLKSKSRVMTRVTSRAHRDDAGRVRGWMSRYQEVELLLQIGEYRRGNDS
ASDLAIDRHEMIERFLRQRHDEYSDWEATIGSLSALCHGSHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-80 50
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 50
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-80 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-81 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-81 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-81 50
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-77 50
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-85 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-73 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-73 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-73 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-72 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-72 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-72 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-62 45
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-71 45
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 3e-71 45
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-71 45
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-71 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-72 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-66 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-75 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-75 44
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-74 44
escN AAC38383.1 EscN Virulence LEE Protein 4e-77 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-76 44
escN AAC31513.1 L0034 Virulence LEE Protein 2e-77 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-76 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-77 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-76 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-77 44
escN AAK26715.1 EscN Virulence LEE Protein 2e-76 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-77 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-77 44
escN AAL57542.1 EscN Virulence LEE Protein 2e-76 44
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-76 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-67 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-67 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-67 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-65 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-65 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-66 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-70 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-60 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-60 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-68 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0192 Protein 6e-92 50
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0048 Protein 2e-91 50
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0390 Protein 5e-86 48
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0515 Protein 4e-73 48
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG1254 Protein 4e-71 47
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG1778 Protein 6e-75 46
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG2459 Protein 4e-71 45
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0555 Protein 1e-71 45
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG2144 Protein 1e-81 44
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0812 Protein 1e-77 44
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG0730 Protein 2e-77 44
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG2331 Protein 1e-64 43
Bphyt_5207 YP_001888936.1 FliI/YscN family ATPase VFG1008 Protein 1e-63 43