Gene Information

Name : Bphyt_5059 (Bphyt_5059)
Accession : YP_001888793.1
Strain :
Genome accession: NC_010676
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1216722 - 1218191 bp
Length : 1470 bp
Strand : -
Note : catalyzes the formation of betaine from betaine aldehyde

DNA sequence :
ATGGCGGTATTCGCAACGCAACGTCTCTATATCGGCGGAGGCTATGTCGACGCCACCAGCGGCGAAACCTTCGACACGCT
CGACCCCGCCACCGGCGAAACGCTCGCGAGCGTGCAGCAGGCCTCGGCGGCCGACGTCGATCGCGCCGTTCGGTCCGCGA
AACAAGGCCAACGCGAATGGGCCGCGCTCACCGCCATGCAGCGTTCGCGCATTTTGCGCCGCGCCGTTGACCTTCTGCGC
GAGCGCAACGACGAACTCGCCGCGCTCGAAACGCGCGACACCGGCAAGCCGATTGCCGAAACCCTCGCGGTGGATATCGT
CACCGGCGCGGACGTGATCGAGTACTACGCGGGGCTCGCCACTGCAATCGAGGGACAGCAGATTCCGCTGCGGCCCACGT
CGTTCGTCTATACGCGGCGCGAACCGCTCGGCGTCTGCGCGGGCATCGGCGCATGGAACTACCCGATCCAGATCGCGTGC
TGGAAATCGGCGCCCGCGCTCGCGGCCGGCAACGCAATGATCTTCAAGCCGAGCGAGATCACGCCACTGTCGGCGCTGAA
ACTCGCCGAGATCTTTACCGAAGCCGGCGTGCCCGCAGGCGTGTTCAATGTCGTGCAAGGCGACGGACGCGTCGGCGCGA
TGCTCGCCGCGCATCCGGACATCGAGAAAATTTCGTTCACCGGCGGCGTGGAAACGGGTAAGAAGGTGATGTCGATGGCG
GGCGCGTCGTCGCTGAAAGAGGTGACGATGGAACTCGGCGGCAAGTCGCCCCTGCTCGTGTTCGACGATGCCAACCTGGA
ACGCGCCGCCGACATCGCCACGAGCGCCAACTTCTTCAGCTCCGGCCAGGTGTGCACCAACGGCACGCGCGTGTTCGTGC
AACGCGGCGTGCTCGACCGTTTCGAGGCTCTGGTGCTGGAACGCGTCAAGCGCATTCGCGTGGGCAAGCCCACCGATGCC
GCCACCAACTTCGGCCCGCTGGTGAGCGCCGCGCAATTGCATAAAGTGTTGGGCTACATTGAAAGTGGCAAGCAGGAAGG
CGCGCGGCTCGTGGCAGGCGGCAAGCGTCTCACCGAGGGCCATTTCGCTGGTGGCCAGTACGTCGAGCCGACCGTGTTCG
CCGACTGCCGTGACGACATGCGCATCGTCCGCGAAGAAATCTTCGGGCCGGTGATGAGCATTCTCGTTTTCGACGACGAA
GACGAAGCCATCGCGCGCGCGAACCACACCGCTTATGGTCTTGCCGCAGGCGTCGTCACGGAGAACCTGGCGCGCGCGCA
TCGCGTGATTCATCGGCTGGAAGCGGGTATCTGCTGGATCAATACGTGGGGCGAGTCGCCCGCGGAAATGCCGGTGGGCG
GGTACAAGCAGTCAGGCGTGGGCCGCGAAAACGGCATCACCACGCTCGAACACTACACGCGCATCAAGTCCGTGCAGGTC
GAACTCGGCCCGTATCAACCGGTGTTCTAA

Protein sequence :
MAVFATQRLYIGGGYVDATSGETFDTLDPATGETLASVQQASAADVDRAVRSAKQGQREWAALTAMQRSRILRRAVDLLR
ERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPIQIAC
WKSAPALAAGNAMIFKPSEITPLSALKLAEIFTEAGVPAGVFNVVQGDGRVGAMLAAHPDIEKISFTGGVETGKKVMSMA
GASSLKEVTMELGGKSPLLVFDDANLERAADIATSANFFSSGQVCTNGTRVFVQRGVLDRFEALVLERVKRIRVGKPTDA
ATNFGPLVSAAQLHKVLGYIESGKQEGARLVAGGKRLTEGHFAGGQYVEPTVFADCRDDMRIVREEIFGPVMSILVFDDE
DEAIARANHTAYGLAAGVVTENLARAHRVIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQV
ELGPYQPVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-68 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-81 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-76 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-80 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-78 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-78 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-78 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_5059 YP_001888793.1 betaine aldehyde dehydrogenase VFG0082 Protein 3e-76 41