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Name : nifJ (CLL_A0790) Accession : YP_001884991.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 806829 - 810329 bp Length : 3501 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGAGAAAAATGAAAACTATGGATGGTAATACTGCAGCAGCTCACGTATCTTATGCATTCACAGAAGTAACTGCAATATA CCCAATCACACCATCATCTCCAATGGCAGAACATGTAGATGAATGGGTTGCACAAGGAAGAAAGAATATATTTGGACAAA CTGTTAAAGTAATGGAAATGCAATCAGAAGCAGGTGCTGCTGGAGCAGTCCACGGTTCTTTACAAGCTGGAGCATTAACA ACTACTTATACAGCTTCACAAGGTTTATTATTAATGATACCAAATATGTACAAGATATCAGGTGAAATGTTACCAGGAGT ATTCCACGTTTCAGCTAGAGCTTTAGCTACATCTTCATTAAACATATTTGGAGACCACCAAGATGTTATGGCAGCAAGAC AAACTGGATTTGCAATGCTTGCTGAAGGATCAGTTCAAGAAGTTATGGATTTATCAGCAGTAGCACATTTAACTGCTATT AAATCTAGAATTCCATTCTTAAACTTCTTTGATGGTTTTAGAACTTCTCACGAAATTCAAAAAATCGAAGTATTAGAATA TGATGAGTTAGCTAAATTAGTTGACATGGATTCTGTTAAAGCTTTCAGAGCAAGAGCTTTAAACCCAGATCATCCTGTAA CTAGAGGTACAGCTCAAAATGCTGATATTTACTTCCAAGAAAGAGAATCAGTAAATAAATTCTACAATGAATTACCAGAT ATGGTTGAAAGCTACATGGCTGAAATCACTAAAATAACTGGTAGAGAATATCACTGCTTTGACTACTATGGTGCTAAAGA TGCAGACAGAATAGTTATAGCAATGGGTTCAGTAACAGACGTAGCTGAAGAAACTGTAGATTACTTAAATGCACATGGAC AAAAAGTTGGTCTTCTTAAAGTAAGACTTTACAGACCATTCTCAGTTGAAAAATTAATAGCTGCTATTCCAAGCACTGTT AAGAAAATCGCTGTTTTAGATAAGACTAAAGAACCAGGTGCTGATGGAGAACCATTATACTTAGACGTTAGAAATGCATT CTACGGAAAAGAAAATGCTCCTGTTATAATTGGCGGAAGATTTGGTTTAGGATCAAAAGATCCAAATCCAGCTCATATTG CTGCTGTTTATGATAACTTAGCAAAAGCTGAACCAAAGAATGGATTTACTATAGGAATCGTTGATGACGTTACAAATACT TCATTAGAAGTAACTGAAGATATAGATGCTACTCCAGAAGGAACTACAGCTTGTAAGTTCTGGGGATTAGGATCAGATGG TACTGTTGGAGCAAACAAGAGTGCTATAAAGATTATTGGAGACCATACAGACATGTATGCTCAAGGATACTTCTTCTATG ATTCAAAGAAATCAGGCGGAATTACAGTATCTCACTTAAGATTTGGTAAGAAGGCAATTAAGTCTCCATACTTAATCAAC AAAGCAGATTTCGTATCTTGTTCTAATCAATCATACGTTCATAAATATAACGTATTAGAAGGATTAAAACCAGGAGCAAC TTTCTTATTAAATACTATCTGGACTCCAGAAGAATTAGAAGAAAAGTTACCTGCTTCATATAAAAGATTTATGGCAAACA ACAACATTAAGTTCTACACTTTAAATGCTGTTGCAATAGCTCAAGAAATAGGTCTTGGCGGAAGAATCAACATGATAATG CAATCAGCTTTCTTCAAGTTAGCTAACATTATACCAGTTGAAGATGCTGTTAAATACTTAAAAGACTCAGTTGTAACTTC TTATGGTAAGAAGGGTGAAAAAGTTGTTAATATGAACAACGCAGCAATCGATAAGGGTGTTGAATCTATCGTTGAAATCA AGCTTCCAGAAGCTTGGAAGACTGTTAAAGACGAAGAAGTAGCTCCACTTAAGAATGCTTCAGAATTCGTTAAGAATATA GTTGTTCCAATGAACAGACAAGAAGGAGATTCTCTTCCAGTTTCTGCTTTTGTTGGAATGGAAGATGGTACATTTGAAGC TGGTACTGCAGCATTCGAAAAGAGAGGAATCGCAGTTAACGTTCCTGTATGGGATGCTGAAAAATGTATTCAATGTAACC AATGTTCATTAGTATGTCCACATGCTTCTATCAGACCAATATTATTAAATGAAGCAGAAAAGAATGCTGCACCTGCTGAT GCAACAATAGTTGATGCTAAAGCTCTTAAGAGTGAAGAAAAATTATTCTACACTATGGGTGTTGCACCATTAGATTGTTC AGGCTGTGGAAACTGTGCTCAAATTTGTCCTGCTCCAGGAAAAGCATTAGTTATGAAACCACAAGAAAGTCAACATAATC AAATTCAAGTTTGGGATTACTTAATAGATGAAGTATCAGCTAAAAAGAACCCAATGAACAAGAATACAGTAAAGGGTAGC CAATTTGAGCAACCATTACTTGAATTCTCAGGAGCTTGTGCTGGTTGTGGAGAAACTCCATACGCTAAGGTTATAACTCA ATTATTTGGAGATAGAATGATGATTGCTAATGCAACTGGATGTTCATCAATCTGGGGTGGATCTGCACCTTCAACTCCAT ATACTAAGAATAAAGAAGGACATGGTCCAGCTTGGGCTAATTCATTATTCGAAGATAATGCTGAATATGGATTAGGTATG TTCTTAGGAGTTAGAGCTATAAGAGAAAGAATCCAAGAAAGAGCAGAAGCTGCTATAGCTGCCAATGATCCAGCTAAAGC TGAATTACAAGATTGGTTAGATAACATGAACGAAGGTGCTGGAACTAGAGATAGAGCTACTAAATTAGTTGCTGCTTTAG AAAAATCTGGTACAGAAGCTGCTAAAGAAATTTTAGCTGAAAAAGACTACTTCGTTAAGAGATCTCAATGGATCTTCGGA GGAGACGGATGGGCTTATGACATCGGATACGGTGGAGTTGACCACGTACTTGCTTCAGGAGAAGACGTAAATGTATTTGT ATTTGATACAGAAGTTTACTCAAATACAGGTGGACAATCTTCTAAATCTACACCAACAGCTGCAATAGCTAAATTTGCTG CTGCAGGTAAGAGAACTAAGAAGAAAGACCTTGGAATGATGGCTATGACTTACGGTTACGTATATGTAGCTCAAATCAAT ATGGGAGCTGATAGAAATCAAGTTCTTAAAGCTATTGCAGAAGCAGAAGCTTACAAGGGACCATCATTAATCATAGCTTA TGCTCCATGTATAAACCATGGAATTAAGCTTGGTATGAGTAACAGCCAATTAGAAGCTAAGAGAGCAACTGAATGTGGAT ACTGGGCAATGTACAGATTCAACCCAGAATTAAAGGGAACTAAGAACCCATTCACATTAGATTCTAAAGCTCCAACTGCT GACTTTAAAGAATTCTTAATGGGTGAAGTAAGATACGCTTCACTTGCTAAAGCATTCCCAGAAGCTGCAGAAGCATTATT TGAAAAGACTTACACTGATGCTATGGAAAGATTAGAAGGATATAAGAAATTAGCTGAATAA Protein sequence : MRKMKTMDGNTAAAHVSYAFTEVTAIYPITPSSPMAEHVDEWVAQGRKNIFGQTVKVMEMQSEAGAAGAVHGSLQAGALT TTYTASQGLLLMIPNMYKISGEMLPGVFHVSARALATSSLNIFGDHQDVMAARQTGFAMLAEGSVQEVMDLSAVAHLTAI KSRIPFLNFFDGFRTSHEIQKIEVLEYDELAKLVDMDSVKAFRARALNPDHPVTRGTAQNADIYFQERESVNKFYNELPD MVESYMAEITKITGREYHCFDYYGAKDADRIVIAMGSVTDVAEETVDYLNAHGQKVGLLKVRLYRPFSVEKLIAAIPSTV KKIAVLDKTKEPGADGEPLYLDVRNAFYGKENAPVIIGGRFGLGSKDPNPAHIAAVYDNLAKAEPKNGFTIGIVDDVTNT SLEVTEDIDATPEGTTACKFWGLGSDGTVGANKSAIKIIGDHTDMYAQGYFFYDSKKSGGITVSHLRFGKKAIKSPYLIN KADFVSCSNQSYVHKYNVLEGLKPGATFLLNTIWTPEELEEKLPASYKRFMANNNIKFYTLNAVAIAQEIGLGGRINMIM QSAFFKLANIIPVEDAVKYLKDSVVTSYGKKGEKVVNMNNAAIDKGVESIVEIKLPEAWKTVKDEEVAPLKNASEFVKNI VVPMNRQEGDSLPVSAFVGMEDGTFEAGTAAFEKRGIAVNVPVWDAEKCIQCNQCSLVCPHASIRPILLNEAEKNAAPAD ATIVDAKALKSEEKLFYTMGVAPLDCSGCGNCAQICPAPGKALVMKPQESQHNQIQVWDYLIDEVSAKKNPMNKNTVKGS QFEQPLLEFSGACAGCGETPYAKVITQLFGDRMMIANATGCSSIWGGSAPSTPYTKNKEGHGPAWANSLFEDNAEYGLGM FLGVRAIRERIQERAEAAIAANDPAKAELQDWLDNMNEGAGTRDRATKLVAALEKSGTEAAKEILAEKDYFVKRSQWIFG GDGWAYDIGYGGVDHVLASGEDVNVFVFDTEVYSNTGGQSSKSTPTAAIAKFAAAGKRTKKKDLGMMAMTYGYVYVAQIN MGADRNQVLKAIAEAEAYKGPSLIIAYAPCINHGIKLGMSNSQLEAKRATECGYWAMYRFNPELKGTKNPFTLDSKAPTA DFKEFLMGEVRYASLAKAFPEAAEALFEKTYTDAMERLEGYKKLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 58 |
