Gene Information

Name : rdgB (CLL_A0418)
Accession : YP_001884653.1
Strain : Clostridium botulinum Eklund 17B
Genome accession: NC_010674
Putative virulence/resistance : Unknown
Product : deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 430469 - 431086 bp
Length : 618 bp
Strand : +
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGAAAAAACTTATTTTAGCTAGTAATAATATAAAGAAAATAAAAGAAATGAAAGAATTATTAAAAGATTTAAATATTGA
AATAAAATCTTTAAATGAAGAAAATATAGATATAGATGTAGAAGAAGATGGTAGTACATTTGAAGAAAATGCGAAGAAAA
AGGCTAAAGAAATATATGATTTTTTAAAATCAAGAAATGAAAGAAATTTTTTAGTTCTTAGTGATGATTCAGGATTAGAA
GTTGATTATTTAAATGGTGCACCAGGGATATATTCAGCTAGATATGCAGGAGAGCATGGTAATGACAAAAAAAATAATGA
AAAATTATTGAGCGAATTATCAAGTGTTCCTACTAGTAAAAGAACTGCTAAATTTGTGTGTCAAATAGCGATGTTTGATG
AAGATGGAAGATATTATTCAATAACTGGAGATGCAAATGGTTGTATTTTAGAAAAGCCACAAGGAGATGATGGCTTTGGA
TATGATCCTTTATTTTTATATAGACCATTAAATAAGACCTTTGCAGAGTTAACTTTAGAAGAAAAGAATGATATAAGCCA
TAGAGGAGTGGCTTTGAAAAAATTAAAGGGCACAATATTAAACCTTATAAGTGAATAG

Protein sequence :
MKKLILASNNIKKIKEMKELLKDLNIEIKSLNEENIDIDVEEDGSTFEENAKKKAKEIYDFLKSRNERNFLVLSDDSGLE
VDYLNGAPGIYSARYAGEHGNDKKNNEKLLSELSSVPTSKRTAKFVCQIAMFDEDGRYYSITGDANGCILEKPQGDDGFG
YDPLFLYRPLNKTFAELTLEEKNDISHRGVALKKLKGTILNLISE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 8e-21 45