Gene Information

Name : CLL_A3530 (CLL_A3530)
Accession : YP_001887675.1
Strain : Clostridium botulinum Eklund 17B
Genome accession: NC_010674
Putative virulence/resistance : Virulence
Product : PTS system ascorbate-specific transporter subunit IIC
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 3736595 - 3737944 bp
Length : 1350 bp
Strand : -
Note : identified by match to protein family HMM PF04215

DNA sequence :
ATGGGTGGTATTTTAAAAGTTGCAGTAGACTTTTTATCAGAACCAGCGGTGTTAATAGGTATTATAGTTTTAGTTGGATT
AGTACTTCAAAAGAAACCAGCTGATGCAATAGTAAAAGCTACATTAAAAGCAATGGTTGGATTTGTAGTTATAGCATCAG
CAGCAGGCGTAATCGTTGGATCATTAGAGCCATTTGGAATTATGTTTGAAGCTGGATTTAATATATCAGGGGTTATACCT
AACAATGAAGCTGTAGTAGCAATGGCTATGGACAAGTTTGGAACAAACACAGCTTTAATTATGACTTTTGGTATGATAGC
TAATATAATAATAGCAAGATTTACAAAGTATAAATACATATTTTTAACAGGTCATCATACATTATTTATGGCATGTATGA
TAGCAGTTATATTAGGATCAGCTGGAATGAGTGGAGCTCACTTAATCTTCACAGGTTCATTAGCATTAGGTCTTATAATG
ATTTTATCACCAGCTATATTACAACCGTTCATGAAGAAAATCACAGGAAATGATTCTGTTGCACTAGGTCACTTCTCAGG
AATTGGTTATGCAGTATCAGCTATAATCGGTAAATTAGTAGGAAAAGATTCAAAATCAACAGAAGAAATGAAAGTTCCTA
AATCTCTAAGTTTCTTAAGGGATTCAGTAGTTTCAATATCACTTACAATGTTAGTATTATATGTTGGGGTTGCTATAGCA
GCAGGTCCAGAATTTGTAGAAACAGAGTTGTCAGGTGGAAAGAATTTTATAGTTTATTCAATGATTCAAGCATTAACTTT
CGCAGCAGGATTTATACTAATCCAAAATGGTGTTAGATTAGTACTTAATGAAATAGTTCCTGCATTTAAGGGGATTTCAA
ACAAATTAGTTCCTAATTCAAAACCAGCATTAGATTGTCCGATAGTATTCCCATATGCACCGAATGCCGTACTAATAGGA
TTTATCTTCTCATTCTTAGGTGGAGTAGTTTCAATGTTAGTATTAGGAGTATTAGGATTAGTAATCATAATCCCAGGTGT
TGTTCCTCACTTCTTCACAGGAGCTACAGCAGCAGTATTTGGTAATGCAACAGGTGGTAGAAGAGGTGCTATGATAGGTT
CATTTGTAAATGGAGTTATGATTTCATTCTTACCAGTAGCATTATTACCTGTACTAGGAAATTTAGGTTTTGCTAATTCA
ACATTCTCAGATGGTGACTTTGGAATAGTTGGTATATTCCTTGGTAAAGTTCAAGAGTTTGTTGGCGGCGTAGGATTAAC
TGCAACATTACTTGGAATAGTTGCGATAATGATAGGTTTAACAATGGTAAGCAAGAAAAAAGAAGCATAA

Protein sequence :
MGGILKVAVDFLSEPAVLIGIIVLVGLVLQKKPADAIVKATLKAMVGFVVIASAAGVIVGSLEPFGIMFEAGFNISGVIP
NNEAVVAMAMDKFGTNTALIMTFGMIANIIIARFTKYKYIFLTGHHTLFMACMIAVILGSAGMSGAHLIFTGSLALGLIM
ILSPAILQPFMKKITGNDSVALGHFSGIGYAVSAIIGKLVGKDSKSTEEMKVPKSLSFLRDSVVSISLTMLVLYVGVAIA
AGPEFVETELSGGKNFIVYSMIQALTFAAGFILIQNGVRLVLNEIVPAFKGISNKLVPNSKPALDCPIVFPYAPNAVLIG
FIFSFLGGVVSMLVLGVLGLVIIIPGVVPHFFTGATAAVFGNATGGRRGAMIGSFVNGVMISFLPVALLPVLGNLGFANS
TFSDGDFGIVGIFLGKVQEFVGGVGLTATLLGIVAIMIGLTMVSKKKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 9e-96 58
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 9e-96 58
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 9e-96 58