Gene Information

Name : CLL_A3461 (CLL_A3461)
Accession : YP_001887634.1
Strain : Clostridium botulinum Eklund 17B
Genome accession: NC_010674
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 3659276 - 3659938 bp
Length : 663 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAGTAATAGGACTTAAAGACATAAAAAAGATATATGGAAAAAAAGATTATGAAACTGTTGCACTTCAAAGTATAGA
TTTAGAAATATCTGAAGGGGAAAGCATTGCTATAATGGGAACTTCTGGTTCTGGTAAATCGACTTTGTTAAATATATTAG
GTTGTTTAGATACTCAAACTAGTGGTAGTTATTTCTTTAATGGGAATTCCATAAATACCTTTAAAGAAAAAGAGTTAGCT
AAGCTTAGAAACTCTTCTTTTGGATTTATAGTCCAATCCTTTGCACTTATTGATGACTTTACAGTATATGAAAATGTAGT
AATTCCACTTGATTATAGTAAAAATAAAAAGAAAAAAAGTGAAGTTATTAACCTTTTGAAGAAACTTGGTATTGATGAAA
AAATAAATAAAACACCAAAGGAATTATCAGGTGGTCAGTGCCAACGTGTTGCAATAGCTAGAGCTTTAGTAAATGATCCA
GAGGTAATTTTAGCTGACGAACCTACAGGGTCATTAGATGGAAGAACTGGACAAGAAATAATGAATATTCTATTGGATTT
AAATAAAAAAGGGAAAACATTAATAATAGTTACACATGATTTAAATATTGCAAAACAATGTTACAGAATAGTGAATATAG
TAGATGGCAAAATTATAAACTAA

Protein sequence : 
MKVIGLKDIKKIYGKKDYETVALQSIDLEISEGESIAIMGTSGSGKSTLLNILGCLDTQTSGSYFFNGNSINTFKEKELA
KLRNSSFGFIVQSFALIDDFTVYENVVIPLDYSKNKKKKSEVINLLKKLGIDEKINKTPKELSGGQCQRVAIARALVNDP
EVILADEPTGSLDGRTGQEIMNILLDLNKKGKTLIIVTHDLNIAKQCYRIVNIVDGKIIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-33 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLL_A3461 YP_001887634.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 5e-43 52
CLL_A3461 YP_001887634.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 2e-32 45
CLL_A3461 YP_001887634.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 4e-33 44
CLL_A3461 YP_001887634.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 5e-36 43
CLL_A3461 YP_001887634.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686946. Protein 4e-31 42