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Name : nifJ (CLL_A2353) Accession : YP_001886542.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 2441466 - 2444981 bp Length : 3516 bp Strand : - Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGAGAAAAACTAAAACGATGGATGGAAATACTGCAGCAGCACATATATCTTATGGATTTACAGAAGTAGCAGCTATTTA CCCAATAACACCTTCATCACCAATGGCAGAACATGTTGATGAATGGGCATCTCAAGGAAGAAAAAACATATTTGGAGAGC CAGTTAAAATGGTTGAAATGCAATCAGAAGCAGGTGCTGCAGGTGCTATGCATGGTTCACTTCAAGCAGGTGCATTAACA ACAACCTATACAGCATCGCAAGGATTATTACTTATGATACCTAATATGTATAAAATAGCTGGGGAGAAATTACCTTGTGT TATGCATGTTTCTGCTAGAGCACTTGCTGCATCTTCATTAAGTATTTTTGGAGATCATCAGGATGTTATGGCAGTAAGAC AAACAGGATTTGCCATGCTTGCAGAAACTTCGGTACAAGAAGTCATGGACTTGTCAGGAGTTGCACATTTAGCGGCTATA AAAGGAAAAATACCATTTGTAAACTTTTTTGATGGATTTAGAACATCTCATGAAATTCAAAAAATTGAAGTTATTGAACA AGACGAGTTAGCTAAATTGGTTGATTATAATGCAATTGATGAATTTAGAAAAAATGCATTAAGCCCTAATCATCCAGTAA CTAGAGGTACAGCTCAAAATCCAGATATATATTTTCAAACAAGGGAAGCAGTAAATAAGGCTTATGATGATATTCCATAT ATAGTAGAAGAATATATGAGTGAGATAACTAAACTTACTGGTAGAGAATATCATTGCTTTGATTATTATGGAGCAAAAGA TGCTGATAGAATAATAATATCAATGGGATCCATTAATGATGTGGTTGAAGAAACAGTTGATTATTTAAATAATAATAAAC AAAAAGTAGGATTAGTAAAGGTTAGATTATATAGACCATTTTCAGTAGAAAGGCTATTAAAAGTAATACCAGAAAGCGTT AAGAAAATAGCAGTCTTAGATAGAACAAAAGAACCAGGAGCAATAGGAGAACCATTATATTTAGATGTAGTTAGATGTTT ATATGGCAAAAAAGATGCGCCTATTATTGTTGGAGGAAGATTTGGATTAGGATCTAAAGATCCAACACCTTCACACATTG CAGCCGTTTTTGATAATTTAATTAGTGATGAACCTAAGAATCAATTTACTATAGGAATAACTGATGATTTAACTAATACA TCATTAAAATTGCATGAAGATATTAATGCAACACCAGAAGGAACTACTTCTTGTAAGTTCTGGGGATTAGGATCAGATGG TACTGTTGGAGCTAATAAGAGTGCTATAAAAATCATAGGAGATCATACTGATATGTATGCTCAAGGATACTTTGATTATG ATTCAAAGAAATCTGGTGGGATTACAGTTTCTCACTTAAGATTTGGAAAAGAACTTATAAAATCAAGATATTTAATAGAT AAAGCAGATTTTATTGCATGCCATAATCAATCATATGTTTATAAATATAATGTATTAAAAGGATTAAAAAAGAATGCCAG ATTTTTATTAAATACTATATGGGATAAAGATGAATTAGAAGAAAAATTACCTGCAAGCATGAAAAAATTTATTGCAGAGA ATGACATAGAATTTTATACAATAAATGCTATTAAAATAGCTCAAGAAATTGGTCTTGGTGGAAGAATAAATATGATAATG CAAGCAGCATTTTTTAAGATAACTAATATTATACCAGTTGAAGATGCAGTTAAATACTTAAAAGAAGCTGTTGTGAATTC ATATGGTAAAAAAGGTGAAAAAGTAGTTAGAATGAACCATGATGCCATTGAAGCTGGCGTTGAAGGCGTAGTAAAAATAG AAATACCGGCTGGATGGAAAAATACTATTGATGATAAAAAAGAATGTAATAAAGATTTACCAGCATTTATAAGGGAAATA GTAAATCCAATGAACAGATTAGAAGGAGATTCTTTACCAGTATCTACTTTTGTTAAACATAATCTTGAAGATGGTACATT TATGGCTGGAACTACTGCCTATGAAAAAAGAGGAATTGCTGTAAATGTTCCTGAATGGTTACAAGATAAATGTATACAAT GTAACCAATGTTCATATGTATGTCCACATGCTACAATAAGACCATTTTTATTAAATGAAGAAGAAAAATTAAAAGCACCA TCATCTATTAAACTTATTGAGCCAAAAGCGTTAAAGAGTGATGAAAAATTATATTATTCAATAGGAGTAACACCTCTTGA TTGTACTGGATGTGGAAATTGTGTTGAAGTTTGTCCAGCACCAGGAAAAGCATTAATTATGAAACCACAAGCTTCTCAAC ATGACCAAATAGAAGTTTGGGATTATACGGTTGAAAAAGTTAATAAGAAAAATCCTATGAACAAAAATACAGTTAAAGGC AGTCAATTTGAAACACCACTTCTTGAATATTCAGGAGCTTGTGCAGGATGTGGAGAAACACCATATGCTAAACTTATAAC TCAATTATTTGGAGACAGAATGATGATAGCAAATGCTACAGGATGTTCATCAATTTGGGCTTCAGGAGCTCCCGCTACAG CTTATACAAAAAATCAACAAGGACATGGTCCGGCATGGGCCAACTCACTATTTGAGGATAATGCTGAATTTGGTTATGGT ATGCACTTAGGCGTTAAAGCTATAAGAGAAAGAATAGCACATAATATTGAAGCAGCATTAAACTCTAACATATCTGAAAA TACAAAAGAAGTATTAAAAGATTGGTTAGATCATAAAGACTGTAGTGAAGGAACTAGAGATAGATCCAATAAAGTTATAG AAGTTCTTGAAAAAGAAAATAATGAACTTGCAAAAGTTATATTAAAGGATAAGGAATTTTTAGTTAATAGATCTCAATGG ATATTTGGTGGAGACGGTTGGAGTTATGATATAGGATATGGTGGTCTTGATCATGTTATTGCATCAGGAGAAAATGTAAA TATATTTATATTTGATACAGAAATATATTCAAATACTGGAGGTCAAGCATCAAAATCTACACCTACAGCTGCAATAGCTA AATTTGCAGCATCAGGAAAGAGAACTAAGAAGAAAGATTTAGGCATGATTGCTATGACTTATGGTTATGTATATGTTGCA CAAATAGCCATGGGAGCAGATAAAAATCAAACACTTAAGGCAATATGTGAAGCAGAAAGCTATGATGGACCATCATTAAT AATTGCCTATGCACCATGTATAAGTCATGGAATAAAAATCGGAATGTCAAATTCTCAAGAAGAAGAAAAGAAAGCAGTTG AATGTGGATATTGGAGTCTTTATAGATATAATCCTATATTAAAAGGAAGTAAGAATCCATTCTCATTAGATTCAAAAGAA CCAAAAGGAAACTTTAGAGAATTCTTAATGGGAGAAGTTAGATATTCTTCACTTGTGAAAGTATTTCCAGAATTATCAGA AGAATTATTTAAAAAGACAGAAGAAGATGCTATTGAAAGATATAATAATTATAAAAAATTAGCATCTCAAGAATAA Protein sequence : MRKTKTMDGNTAAAHISYGFTEVAAIYPITPSSPMAEHVDEWASQGRKNIFGEPVKMVEMQSEAGAAGAMHGSLQAGALT TTYTASQGLLLMIPNMYKIAGEKLPCVMHVSARALAASSLSIFGDHQDVMAVRQTGFAMLAETSVQEVMDLSGVAHLAAI KGKIPFVNFFDGFRTSHEIQKIEVIEQDELAKLVDYNAIDEFRKNALSPNHPVTRGTAQNPDIYFQTREAVNKAYDDIPY IVEEYMSEITKLTGREYHCFDYYGAKDADRIIISMGSINDVVEETVDYLNNNKQKVGLVKVRLYRPFSVERLLKVIPESV KKIAVLDRTKEPGAIGEPLYLDVVRCLYGKKDAPIIVGGRFGLGSKDPTPSHIAAVFDNLISDEPKNQFTIGITDDLTNT SLKLHEDINATPEGTTSCKFWGLGSDGTVGANKSAIKIIGDHTDMYAQGYFDYDSKKSGGITVSHLRFGKELIKSRYLID KADFIACHNQSYVYKYNVLKGLKKNARFLLNTIWDKDELEEKLPASMKKFIAENDIEFYTINAIKIAQEIGLGGRINMIM QAAFFKITNIIPVEDAVKYLKEAVVNSYGKKGEKVVRMNHDAIEAGVEGVVKIEIPAGWKNTIDDKKECNKDLPAFIREI VNPMNRLEGDSLPVSTFVKHNLEDGTFMAGTTAYEKRGIAVNVPEWLQDKCIQCNQCSYVCPHATIRPFLLNEEEKLKAP SSIKLIEPKALKSDEKLYYSIGVTPLDCTGCGNCVEVCPAPGKALIMKPQASQHDQIEVWDYTVEKVNKKNPMNKNTVKG SQFETPLLEYSGACAGCGETPYAKLITQLFGDRMMIANATGCSSIWASGAPATAYTKNQQGHGPAWANSLFEDNAEFGYG MHLGVKAIRERIAHNIEAALNSNISENTKEVLKDWLDHKDCSEGTRDRSNKVIEVLEKENNELAKVILKDKEFLVNRSQW IFGGDGWSYDIGYGGLDHVIASGENVNIFIFDTEIYSNTGGQASKSTPTAAIAKFAASGKRTKKKDLGMIAMTYGYVYVA QIAMGADKNQTLKAICEAESYDGPSLIIAYAPCISHGIKIGMSNSQEEEKKAVECGYWSLYRYNPILKGSKNPFSLDSKE PKGNFREFLMGEVRYSSLVKVFPELSEELFKKTEEDAIERYNNYKKLASQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 58 |
