|
Name : CLL_A0207 (CLL_A0207) Accession : YP_001884443.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 215746 - 218190 bp Length : 2445 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : TTGAGTATGGATTTCAATAAATTTACAGAAAGAACTCAATCAATAATATTAGAAGCACAAATTGAATCACAAGAGTTTAA ACATGGATATGTAGGTACAGAACATTTATTATTGGGTTTAGTAAAAGAAAAAGGCCAGCAATCCAATATATTAAACGAAT TTGGTATTGATGCTGAAATAGTAAGAGATATGATAAGTAGATATTTAGGCTATGGTGAATTACAAATGCCTGAAGATGAT ATATTATTAACACCTAGAGCAAAAAAACTTCTTGATGAAAGCTTTATGGAGGCTAAAAAATTTAGTCATAAAAATGTTAG TCCAGAACATATATTAATGGCATTGCTTAATCAAGAAGAAGGAATGGCGTATACTATATTAAAAAATTTAAAATTAAATT TTAAGGAGATAAAAGATAAATTATTTATATTTTTAAATGGTCAGTATTCAGATGAAAATGAAGAAATTAAATCTCCAAGA TCAGAAAAAACTAAAACTCCTATGTTAGATAAATACGGAAGAGATCTAACACAATTTGCAAGAGATGGTGGATTAGATCC TGTGATTGGAAGAGATTTAGAAAATCAAAGAGTTTTAGAAATATTATGTAGAAGGATAAAAAACAATCCTTGTTTAATAG GTGAACCTGGAGTTGGAAAGACAGCAGTAATTGAGGGGTTAGCACAAAGGATTGTAGAAGGTAATATTCCTGAAATACTA AGAGGTAAGAGAATTGTTTCACTTGATTTGACTGCATTACTTGCAGGTGCTAAATATAGAGGTGAATTTGAAGATAGATT AAAAAAGGTAATGCTAGAAATAGAAAAAGATAAAAGCATTATAATATTCATAGATGAAATTCATACAATAATAGGTGCAG GAGCAGCTGAAGGTGCAATAGATGCTTCAAATATATTAAAACCAGCACTTTCTAGAGGCGAAATTCAATGTATAGGTGCA ACAACTATAAACGAATATAGAAAACATATAGAAAAAGATTCTGCTTTAGAAAGAAGATTTCAACCTGTTAATGTTGGTGA GCCATCAAAAGATGAAACACTAATAATATTAAGAGGATTAAGAGAAAAGTATGAAGAACATCACAATGTTAACATTACAG ATAAAGCATTAGAAGCTGCTGTTGAGTTATCTGATAGATATATTACAGATAGATTTATGCCAGACAAAGCTATTGATTTG ATTGATGAGGCATGTGCTAAAGTTAGAATAAAAAATCTAATTCCACCTGCTAATTTAAAATCAATGGAAGATGAAATAAA AGAAACAACTAAAGAAAAAGAAGAATGTATTAGGGTCCAAGATTTTGAAAAAGCGGCAAATATGAGAGATATTGAAAATG ATTTAAAAGAAGAATTAGAAGCACTTAGAAAAGAGTGGAGTGATAAAAATTCTAATAAGCAATTAAATGTAGATGAAGAA GATATAGCAGAAGTTGTATCATCTTGGACTAAAATACCTGCTAAAAAACTTACAGAAAAAGAAAGTGAAAAATTACTAAA ACTTGAAAATATATTACAAAAAAGAGTTATAGGTCAAACTGAAGCTGTTGAATCTATAGCTAAGGCAGTAAGAAGAGCTA GAGTGGGAATAAAAGATCCTAATAGACCAATCGGAACGTTTATATTTTTAGGACCTACAGGTGTTGGTAAAACAGAACTT TCAAAAGCATTAGCTGAAACTATGTTTGGAGATGAAAATAGCATAATAAGAATAGATATGTCTGAATACATGGAAAGCAA CTCAGTTTCTAAATTAATAGGTTCACCTCCAGGATATGTAGGATATGATGATGGAGGTCAATTAACAGAAGCAGTGAGGA GAAAGCCTTATTCAGTAGTACTTCTAGATGAAATTGAAAAAGCTCATCAAGATGTATTTAATATATTACTTCAAATTATG GAAGATGGGAGACTTACAGATTCCCATGGAAAAGTAGTTAATTTTAAAAATACAATAGTTATAATGACTTCTAATGTAGG AGCACATCAAATAAAAAAACAAAAAACAATTGGATTTAATACAAGTATTGATGAAAATTCAGAATATGAAAAGATGAAAG ATAATGTTTTAGAAGAATTAAAGAGAAGCTTTAAACCAGAATTCTTAAATAGAATAGACGATACAATAGTATTCCATAAA TTAAAAGAAGATGATCTTTTAGATATAGTTGATTTAATGTTAAAATCTATTACTAAAAGACTTGAAAATAAAGATATACA CTTAAACTTTGAAAAAGATAGTAAAAAATTCTTAATTAATAAAAGAATTGATTTAAATTATGGAGCAAGACCATTAAGAA GAATTATTACTAAAGAAGTAGAAGATAAATTAAGTGAAGAGATACTTTTAGGTAATATAAAAATTGGAGATAGAATTAAA GTAAATGAATCAAAAGATAATTTAGTTTTTACAAAACTAGATTAA Protein sequence : MSMDFNKFTERTQSIILEAQIESQEFKHGYVGTEHLLLGLVKEKGQQSNILNEFGIDAEIVRDMISRYLGYGELQMPEDD ILLTPRAKKLLDESFMEAKKFSHKNVSPEHILMALLNQEEGMAYTILKNLKLNFKEIKDKLFIFLNGQYSDENEEIKSPR SEKTKTPMLDKYGRDLTQFARDGGLDPVIGRDLENQRVLEILCRRIKNNPCLIGEPGVGKTAVIEGLAQRIVEGNIPEIL RGKRIVSLDLTALLAGAKYRGEFEDRLKKVMLEIEKDKSIIIFIDEIHTIIGAGAAEGAIDASNILKPALSRGEIQCIGA TTINEYRKHIEKDSALERRFQPVNVGEPSKDETLIILRGLREKYEEHHNVNITDKALEAAVELSDRYITDRFMPDKAIDL IDEACAKVRIKNLIPPANLKSMEDEIKETTKEKEECIRVQDFEKAANMRDIENDLKEELEALRKEWSDKNSNKQLNVDEE DIAEVVSSWTKIPAKKLTEKESEKLLKLENILQKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGTFIFLGPTGVGKTEL SKALAETMFGDENSIIRIDMSEYMESNSVSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIM EDGRLTDSHGKVVNFKNTIVIMTSNVGAHQIKKQKTIGFNTSIDENSEYEKMKDNVLEELKRSFKPEFLNRIDDTIVFHK LKEDDLLDIVDLMLKSITKRLENKDIHLNFEKDSKKFLINKRIDLNYGARPLRRIITKEVEDKLSEEILLGNIKIGDRIK VNESKDNLVFTKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLL_A0207 | YP_001884443.1 | negative regulator of genetic competence ClpC/mecB | VFG0079 | Protein | 0.0 | 56 |
| CLL_A0207 | YP_001884443.1 | negative regulator of genetic competence ClpC/mecB | VFG0080 | Protein | 9e-134 | 50 |
