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Name : treC (CLL_A1820) Accession : YP_001886013.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 1903781 - 1905439 bp Length : 1659 bp Strand : - Note : identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : ATGAAAGACTTTAAAAAAAGTACTGTTTATCAAATATATCCTAAATCATTTAATGATTCAAATGGAGATGGAATAGGCGA TTTAAATGGAGTAATAGACAAACTAGATTATTTAGAGGAATTAGGGATTGATTATATTTGGCTTACTCCTTTTTATGTAT CACCACAAAATGATAATGGCTATGATGTAGCTGATTATTATAATATAGATCCTTTGTTTGGAACTAATGAGGATTTTGAT AGACTTGTTAAAGAAGCTGAAAAAAGAAATATTAATATAATGCTTGATATGGTATTTAATCATACTTCAACGGAGCATCA ATGGTTTAAAAATGCCCTAAATGGAGATGAAAAATTCAAAGACTTTTATATATTTAGAAAAGGTAAAGACAGCAATCCAC CAACTAATTGGAAATCAAAATTCGGAGGAAATGCTTGGGAATATATAGACACCTTTGATGAATACTATTTGCATCTATTT GATAAAACACAAGGAGATTTAGACTGGACCAATTTAGATGTTAAAAATGAAATATATAAAATAGTAAACCATTGGATAAA CAAAGGTGTTAAAGGATTTAGGTTTGATGTTATAAATCTAATTTCAAAGCCGGAAAAATTTGAAGATGATGTTATTGGTG ATGGAAGAAGATTTTATACAGATGGACCTAATATACATAAATATTTAAAGGAATTAAATGAAAATACGTTTGGTAAGTAT GACGATATAATAACAGTTGGAGAAATGTCTTCTACAACTATAGATAACTGTATTAAGTATTCAAATCCAAATGAAAAAGA GCTATCTATGGTATTTAATTTCCATCATTTAAAAGTAGATTATGACAATGGTGATAAATGGACACTTATGAACTTTGATT TTAAATTACTAAAATCTATCTTTAAAGAATGGCAGGAAGGTATGGAACAAGGAAATGGTTGGAATGCAGTATTTTGGTGT AACCATGATCAGCCAAGAATAATTTCTAGATTTGGAAACACTGATAAGTATCATAAAGAAAGTGGAAAGATGCTTGGGAC TTGTATTCACATGATGAGAGGAACACCATATATTTATCAGGGTGAAGAATTTGGAATGACAAATCCTAATTTTAATTCAA TAGATGAATATAGAGATATTGAATCTAAGAATTATTATGATATTTTAAAAGAAAATCATGTTGAAGAGGAAGAAATATAT AAGATATTAGCCTCAAAATCAAGAGATAATTCAAGAACACCTATGCAATGGAATGATGAAAAAAATAGTGGTTTTTCTAA TAATGAGCCTTGGATACCAGTAGGTAAATCTTATAAAGAAATAAATGCTAAAAATGCATTAAAAGATAATGATTCTATAT TCTATCATTATAAAAAACTTATAGATATTAGAAAAGAATATGATGTTGTTTCAAATGGGTCTTTCAATATGATACTTGAA GAGCATGAAAAAGTTTTAGCATATACTAGAGAATATAATAATGAGAAATTAATAGTTTTAAATAACTTCTATGATGAAGA GACTGAGGTATTATTACCACATGATCTTTTATGTGGTAATGGTAGAATATTAATTTCAAATTATAAAGATAGTATGGATT TAAATGATAAAATTTTACTTAGACCATATGAATCTATTGTTTATATTGTTGAGAATTAA Protein sequence : MKDFKKSTVYQIYPKSFNDSNGDGIGDLNGVIDKLDYLEELGIDYIWLTPFYVSPQNDNGYDVADYYNIDPLFGTNEDFD RLVKEAEKRNINIMLDMVFNHTSTEHQWFKNALNGDEKFKDFYIFRKGKDSNPPTNWKSKFGGNAWEYIDTFDEYYLHLF DKTQGDLDWTNLDVKNEIYKIVNHWINKGVKGFRFDVINLISKPEKFEDDVIGDGRRFYTDGPNIHKYLKELNENTFGKY DDIITVGEMSSTTIDNCIKYSNPNEKELSMVFNFHHLKVDYDNGDKWTLMNFDFKLLKSIFKEWQEGMEQGNGWNAVFWC NHDQPRIISRFGNTDKYHKESGKMLGTCIHMMRGTPYIYQGEEFGMTNPNFNSIDEYRDIESKNYYDILKENHVEEEEIY KILASKSRDNSRTPMQWNDEKNSGFSNNEPWIPVGKSYKEINAKNALKDNDSIFYHYKKLIDIRKEYDVVSNGSFNMILE EHEKVLAYTREYNNEKLIVLNNFYDEETEVLLPHDLLCGNGRILISNYKDSMDLNDKILLRPYESIVYIVEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-122 | 46 |
